Aliases for LINC02683 Gene

Subcategory (RNA class) for LINC02683 Gene

lncRNA

Number of RNA Genes sources:

2 / 17

Aliases for LINC02683 Gene

  • Long Intergenic Non-Protein Coding RNA 2683 2 3 5
  • LINC02683 2 5
  • NONHSAG007714.2 91
  • Lnc-RRAS2-9 165

External Ids for LINC02683 Gene

Summaries for LINC02683 Gene

GeneCards Summary for LINC02683 Gene

LINC02683 (Long Intergenic Non-Protein Coding RNA 2683) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for LINC02683 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LINC02683 Gene

Genomics for LINC02683 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for LINC02683 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH11J013928 Enhancer 1.2 Ensembl ENCODE dbSUPER 600.7 -1.5 -1471 3.4 ZNF629 LEF1 JUND FOXA1 PKNOX1 REST DPF2 HDAC1 SOX6 FOXJ2 LINC02683 piR-40110-089 SPON1 FAR1
GH11J013922 Promoter/Enhancer 1.2 Ensembl ENCODE dbSUPER 0.7 +3.4 3408 2.4 JUND PKNOX1 ZNF24 HDAC1 EP300 NRF1 MGA ZNF766 CTBP1 ESR1 LINC02683 piR-46381-015 SPON1 FAR1
GH11J013930 Enhancer 0.2 dbSUPER 0.7 -4.5 -4530 1.6 LINC02683 piR-40110-089 SPON1 FAR1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LINC02683 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for LINC02683 Gene

Genomic Locations for LINC02683 Gene
chr11:13,921,447-13,927,230
(GRCh38/hg38)
Size:
5,784 bases
Orientation:
Minus strand
chr11:13,942,997-13,946,410
(GRCh37/hg19)
Size:
3,414 bases
Orientation:
Minus strand

Genomic View for LINC02683 Gene

Genes around LINC02683 on UCSC Golden Path with GeneCards custom track
LINC02683 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Cytogenetic band:
LINC02683 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LINC02683 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LINC02683 Gene

Proteins for LINC02683 Gene

Post-translational modifications for LINC02683 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LINC02683 Gene

Domains & Families for LINC02683 Gene

Gene Families for LINC02683 Gene

genes like me logo Genes that share domains with LINC02683: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LINC02683 Gene

Function for LINC02683 Gene

Phenotypes From GWAS Catalog for LINC02683 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LINC02683 Gene

Localization for LINC02683 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LINC02683 Gene

Pathways & Interactions for LINC02683 Gene

PathCards logo

SuperPathways for LINC02683 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LINC02683 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LINC02683 Gene

Drugs & Compounds for LINC02683 Gene

No Compound Related Data Available

Transcripts for LINC02683 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for LINC02683 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS0000610746_9606 lncRNA 684 3

Ensembl: ENST00000532065 (view in UCSC) ,

LNCipedia: lnc-RRAS2-9:1,

NONCODE: NONHSAT018120.2,

URS0000A76630_9606 lncRNA 687 2

HGNC: 54179,

RefSeq: NR_135052,

URS00009BD2BC_9606 lncRNA 753 1

NONCODE: NONHSAT160097.1,

URS0000D5B0EC_9606 lncRNA 687 1

LNCipedia: lnc-RRAS2-9:2,

LINC02683 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Additional transcripts not in RNAcentral for LINC02683 Gene

2 NCBI additional mRNA sequence :

Alternative Splicing Database (ASD) splice patterns (SP) for LINC02683 Gene

No ASD Table

Relevant External Links for LINC02683 Gene

GeneLoc Exon Structure for
LINC02683

Expression for LINC02683 Gene

Transcriptomic regulation report from SPP (The Signaling Pathways Project) for LINC02683

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LINC02683 Gene

Orthologs for LINC02683 Gene

Evolution for LINC02683 Gene

ENSEMBL:
Gene Tree for LINC02683 (if available)
TreeFam:
Gene Tree for LINC02683 (if available)

No data available for Orthologs for LINC02683 Gene

Paralogs for LINC02683 Gene

No data available for Paralogs for LINC02683 Gene

Variants for LINC02683 Gene

Additional dbSNP identifiers (rs#s) for LINC02683 Gene

Additional Variant Information for LINC02683 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
LINC02683

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for LINC02683 Gene

Disorders for LINC02683 Gene

No disorders were found for LINC02683 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LINC02683 Gene

Publications for LINC02683 Gene

No publications were found for LINC02683 Gene.

No data available for Mastermind for LINC02683 Gene

Products for LINC02683 Gene

Sources for LINC02683 Gene