Aliases for LINC02682 Gene

Data sources for LINC02682 Gene:

Subcategory (RNA class) for LINC02682 Gene


Aliases for LINC02682 Gene

External Ids for LINC02682 Gene

Summaries for LINC02682 Gene

GeneCards Summary for LINC02682 Gene

LINC02682 (Long Intergenic Non-Protein Coding RNA 2682) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for LINC02682 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LINC02682 Gene

Genomics for LINC02682 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for LINC02682 Gene
GeneHancer (GH) Identifier GH Type GH
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH11J015911 Enhancer 0.6 Ensembl ENCODE 260.9 +1.6 1572 3.8 RAD21 SPI1 CTCF MEIS2 ZBTB17 CEBPB LINC02682 lnc-SOX6-1 HSALNG0082884 C11orf58 INSC
GH11J015941 Enhancer 0.9 ENCODE CraniofacialAtlas 8.1 +30.6 30552 0.8 CTCF REST VEZF1 SMC3 YY1 RAD21 BHLHE40 NRF1 RB1 IKZF1 LINC02682 HSALNG0082884 lnc-SOX6-1 C11orf58 INSC
GH11J015937 Enhancer 0.6 Ensembl ENCODE 10.6 +27.6 27623 1.5 RAD21 CTCF SP1 LINC02682 C11orf58 SOX6 lnc-SOX6-1 HSALNG0082884 INSC
GH11J015920 Enhancer 0.3 Ensembl 11 +10.7 10673 1.2 ZMYM3 EGR2 LINC02682 lnc-SOX6-1 HSALNG0082884 C11orf58 INSC
GH11J015903 Enhancer 0.6 Ensembl 0.4 -6.9 -6927 0.4 RXRA CTBP1 RARA STAT3 JUND PKNOX1 BHLHE40 HNF4A HNRNPL ESRRA HSALNG0082881 LINC02682 HSALNG0082880 C11orf58 INSC
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LINC02682 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for LINC02682 Gene

Latest Assembly
20,600 bases
Plus strand

Previous Assembly
(GRCh37/hg19 by Ensembl)
16,487 bases
Plus strand

Genomic View for LINC02682 Gene

Genes around LINC02682 on UCSC Golden Path with GeneCards custom track
LINC02682 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Cytogenetic band:
LINC02682 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LINC02682 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LINC02682 Gene

Proteins for LINC02682 Gene

Post-translational modifications for LINC02682 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LINC02682 Gene

Domains & Families for LINC02682 Gene

Gene Families for LINC02682 Gene

genes like me logo Genes that share domains with LINC02682: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LINC02682 Gene

Function for LINC02682 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LINC02682 Gene

Localization for LINC02682 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LINC02682 Gene

Pathways & Interactions for LINC02682 Gene

PathCards logo

SuperPathways for LINC02682 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LINC02682 Gene


No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LINC02682 Gene

Drugs & Compounds for LINC02682 Gene

No Compound Related Data Available

Transcripts for LINC02682 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for LINC02682 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS0000EEF26D_9606 lncRNA 1587 1

Ensembl: ENST00000668376 (view in UCSC) ,

URS0000EEFD9A_9606 lncRNA 1377 1

Ensembl: ENST00000667221 (view in UCSC) ,

URS0000EF5D10_9606 lncRNA 1372 1

Ensembl: ENST00000669725 (view in UCSC) ,

URS0000EF66E5_9606 lncRNA 1361 1

Ensembl: ENST00000670509 (view in UCSC) ,

URS0000EF4D74_9606 lncRNA 1317 1

Ensembl: ENST00000664817 (view in UCSC) ,

LINC02682 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for LINC02682 Gene

No ASD Table

Relevant External Links for LINC02682 Gene

GeneLoc Exon Structure for

No data available for mRNA/cDNA for LINC02682 Gene

Expression for LINC02682 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LINC02682 Gene

Orthologs for LINC02682 Gene

Evolution for LINC02682 Gene

Gene Tree for LINC02682 (if available)
Gene Tree for LINC02682 (if available)

No data available for Orthologs for LINC02682 Gene

Paralogs for LINC02682 Gene

No data available for Paralogs for LINC02682 Gene

Variants for LINC02682 Gene

dbSNP identifiers (rs#s) for variants without ClinVar clinical significance for LINC02682 Gene

All consequence types are included: molecular consequences (e.g. missense, synonymous), and location-based (e.g. intron, upstream).

Additional Variant Information for LINC02682 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for LINC02682 Gene

Disorders for LINC02682 Gene

No disorders were found for LINC02682 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LINC02682 Gene

Publications for LINC02682 Gene

  1. Lnc-SOX6-1 upregulation correlates with poor risk stratification and worse treatment outcomes, and promotes cell proliferation while inhibits apoptosis in pediatric acute myeloid leukemia. (PMID: 30624855) Guan X … Guo Y (International journal of laboratory hematology 2019) 2 3

No data available for Mastermind for LINC02682 Gene

Products for LINC02682 Gene

Sources for LINC02682 Gene