Aliases for LINC02677 Gene

Data sources for LINC02677 Gene:

RNA type for LINC02677 Gene

lncRNA

Aliases for LINC02677 Gene

External Ids for LINC02677 Gene

Previous GeneCards Identifiers for LINC02677 Gene

  • GC10M005617

Summaries for LINC02677 Gene

GeneCards Summary for LINC02677 Gene

LINC02677 (Long Intergenic Non-Protein Coding RNA 2677) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for LINC02677 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LINC02677 Gene

Genomics for LINC02677 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for LINC02677 Gene
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LINC02677 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for LINC02677 Gene

Latest Assembly
chr10:5,594,984-5,632,566
(GRCh38/hg38)
Size:
37,583 bases
Orientation:
Minus strand

Genomic View for LINC02677 Gene

Genes around LINC02677 on UCSC Golden Path with GeneCards custom track
LINC02677 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Cytogenetic band:
LINC02677 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LINC02677 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LINC02677 Gene

Proteins for LINC02677 Gene

Post-translational modifications for LINC02677 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LINC02677 Gene

Domains & Families for LINC02677 Gene

Gene Families for LINC02677 Gene

genes like me logo Genes that share domains with LINC02677: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LINC02677 Gene

Function for LINC02677 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LINC02677 Gene

Localization for LINC02677 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LINC02677 Gene

Pathways & Interactions for LINC02677 Gene

PathCards logo

SuperPathways for LINC02677 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LINC02677 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LINC02677 Gene

Drugs & Compounds for LINC02677 Gene

No Compound Related Data Available

Transcripts for LINC02677 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for LINC02677 Gene

RNAcentral Transcript ID RNA Type Length (nts) # of Sources Source Identifiers and Annotations
URS0000D5A084_9606 lncRNA 706 2

Ensembl: ENST00000478294 (view in UCSC) ,

LNCipedia: lnc-ASB13-3:7,

URS000217A538_9606 lncRNA 1407 1

Ensembl: ENST00000676438 (view in UCSC) ,

URS000218411A_9606 lncRNA 1266 1

Ensembl: ENST00000675383 (view in UCSC) ,

URS000217CA83_9606 lncRNA 1108 1

Ensembl: ENST00000674724 (view in UCSC) ,

URS00021815D2_9606 lncRNA 1105 1

Ensembl: ENST00000675960 (view in UCSC) ,

LINC02677 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for LINC02677 Gene

No ASD Table

Relevant External Links for LINC02677 Gene

GeneLoc Exon Structure for
LINC02677

No data available for mRNA/cDNA for LINC02677 Gene

Expression for LINC02677 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LINC02677 Gene

Orthologs for LINC02677 Gene

Evolution for LINC02677 Gene

ENSEMBL:
Gene Tree for LINC02677 (if available)
TreeFam:
Gene Tree for LINC02677 (if available)
Alliance of Genome Resources:
Additional Orthologs for LINC02677

No data available for Orthologs for LINC02677 Gene

Paralogs for LINC02677 Gene

No data available for Paralogs for LINC02677 Gene

Variants for LINC02677 Gene

dbSNP identifiers (rs#s) for variants without ClinVar clinical significance for LINC02677 Gene

All consequence types are included: molecular consequences (e.g. missense, synonymous), and location-based (e.g. intron, upstream).

Additional Variant Information for LINC02677 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
LINC02677
Leiden Open Variation Database (LOVD)
LINC02677

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for LINC02677 Gene

Disorders for LINC02677 Gene

No disorders were found for LINC02677 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LINC02677 Gene

Publications for LINC02677 Gene

  1. A genome-wide scan for breast cancer risk haplotypes among African American women. (PMID: 23468962) Song C … Stram DO (PloS one 2013) 3

No data available for Mastermind for LINC02677 Gene

Products for LINC02677 Gene

Sources for LINC02677 Gene