Aliases for LINC02672 Gene

Subcategory (RNA class) for LINC02672 Gene

lncRNA

Number of RNA Genes sources:

4 / 17

Aliases for LINC02672 Gene

  • Long Intergenic Non-Protein Coding RNA 2672 2 3 5
  • LINC02672 2 5
  • NONHSAG005930.2 91
  • HSALNG0078039 164
  • Lnc-MBL2-2 165

External Ids for LINC02672 Gene

Summaries for LINC02672 Gene

GeneCards Summary for LINC02672 Gene

LINC02672 (Long Intergenic Non-Protein Coding RNA 2672) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for LINC02672 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LINC02672 Gene

Genomics for LINC02672 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for LINC02672 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH10J053029 Enhancer 0.7 Ensembl ENCODE 672.2 -0.2 -231 2.2 IKZF2 RUNX3 CTBP1 PKNOX1 IKZF1 DPF2 TBX21 SMARCE1 LINC02672 SNRPEP8 lnc-DKK1-3 MBL2
GH10J052964 Enhancer 1.1 Ensembl ENCODE dbSUPER 40.8 +62.8 62842 5.9 SP1 HNRNPL TEAD4 BACH1 LARP7 RELA TCF12 IKZF2 RCOR1 POLR2A LOC105378308 LINC02672 ENSG00000285958 lnc-MBL2-8 MBL2
GH10J053022 Enhancer 0.7 Ensembl ENCODE 69.3 +7.2 7150 1.8 TEAD4 USF1 ATF2 NANOG SP1 POU5F1 MAFK LINC02672 lnc-MBL2-8 MBL2
GH10J053012 Enhancer 0.9 FANTOM5 Ensembl 46.6 +16.8 16769 3.4 IKZF2 TRIM22 PKNOX1 ARID3A DPF2 RELB ARNT NBN IKZF1 BMI1 LINC02672 MBL2 lnc-MBL2-8
GH10J053007 Enhancer 1 Ensembl ENCODE 24 +22.9 22870 0.8 GATAD2A TFE3 SOX13 RCOR2 RXRB SP1 TOE1 CEBPA FOXK2 ETS1 LINC02672 lnc-MBL2-8 MBL2
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LINC02672 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for LINC02672 Gene

Genomic Locations for LINC02672 Gene
chr10:52,970,999-53,030,270
(GRCh38/hg38)
Size:
59,272 bases
Orientation:
Minus strand
chr10:54,733,248-54,735,575
(GRCh37/hg19)
Size:
2,328 bases
Orientation:
Minus strand

Genomic View for LINC02672 Gene

Genes around LINC02672 on UCSC Golden Path with GeneCards custom track
LINC02672 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Cytogenetic band:
LINC02672 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LINC02672 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LINC02672 Gene

Proteins for LINC02672 Gene

Post-translational modifications for LINC02672 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LINC02672 Gene

Domains & Families for LINC02672 Gene

Gene Families for LINC02672 Gene

genes like me logo Genes that share domains with LINC02672: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LINC02672 Gene

Function for LINC02672 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LINC02672 Gene

Localization for LINC02672 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LINC02672 Gene

Pathways & Interactions for LINC02672 Gene

PathCards logo

SuperPathways for LINC02672 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LINC02672 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LINC02672 Gene

Drugs & Compounds for LINC02672 Gene

No Compound Related Data Available

Transcripts for LINC02672 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for LINC02672 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS000031575D_9606 lncRNA 415 4

Ensembl: ENST00000444155 (view in UCSC) ,

LncBook: HSALNT0162862,

LNCipedia: lnc-MBL2-2:6,

NONCODE: NONHSAT013444.2,

URS0000EEE793_9606 lncRNA 1613 2

HGNC: 54159,

Ensembl: ENST00000668157 (view in UCSC) ,

URS0000EF6387_9606 lncRNA 1540 1

Ensembl: ENST00000654808 (view in UCSC) ,

URS00008BD6CA_9606 lncRNA 3418 3

LncBook: HSALNT0162854,

LNCipedia: lnc-MBL2-2:2,

NONCODE: NONHSAT013442.2,

URS00008B3EF5_9606 lncRNA 329 3

LncBook: HSALNT0162864,

LNCipedia: lnc-MBL2-2:5,

NONCODE: NONHSAT013445.2,

LINC02672 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for LINC02672 Gene

No ASD Table

Relevant External Links for LINC02672 Gene

GeneLoc Exon Structure for
LINC02672

No data available for mRNA/cDNA for LINC02672 Gene

Expression for LINC02672 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LINC02672 Gene

Orthologs for LINC02672 Gene

Evolution for LINC02672 Gene

ENSEMBL:
Gene Tree for LINC02672 (if available)
TreeFam:
Gene Tree for LINC02672 (if available)

No data available for Orthologs for LINC02672 Gene

Paralogs for LINC02672 Gene

No data available for Paralogs for LINC02672 Gene

Variants for LINC02672 Gene

Additional dbSNP identifiers (rs#s) for LINC02672 Gene

Additional Variant Information for LINC02672 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
LINC02672

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for LINC02672 Gene

Disorders for LINC02672 Gene

Additional Disease Information for LINC02672

No disorders were found for LINC02672 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for LINC02672 Gene

Publications for LINC02672 Gene

No publications were found for LINC02672 Gene.

Products for LINC02672 Gene

Sources for LINC02672 Gene