Aliases for LINC02661 Gene

Subcategory (RNA class) for LINC02661 Gene

lncRNA

Number of RNA Genes sources:

3 / 17

Aliases for LINC02661 Gene

  • Long Intergenic Non-Protein Coding RNA 2661 2 3 5
  • LINC02661 2 5
  • NONHSAG006832.2 91
  • HSALNG0080520 164
  • Lnc-ADD3-3 165

External Ids for LINC02661 Gene

Summaries for LINC02661 Gene

GeneCards Summary for LINC02661 Gene

LINC02661 (Long Intergenic Non-Protein Coding RNA 2661) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for LINC02661 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LINC02661 Gene

Genomics for LINC02661 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for LINC02661 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH10J108789 Enhancer 0.6 Ensembl ENCODE 0.2 +81.6 81562 0.6 PKNOX1 JUND CEBPB FOS BATF POLR2A piR-38051-050 MAPKAPK5P1 lnc-ADD3-11 LINC02661 lnc-ADD3-12
GH10J108791 Enhancer 0.2 Ensembl 0.2 +80.7 80662 0.4 piR-38051-050 MAPKAPK5P1 lnc-ADD3-11 LINC02661 lnc-ADD3-12
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LINC02661 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for LINC02661 Gene

Genomic Locations for LINC02661 Gene
chr10:108,708,539-108,840,686
(GRCh38/hg38)
Size:
132,148 bases
Orientation:
Plus strand
chr10:110,470,276-110,599,121
(GRCh37/hg19)
Size:
128,846 bases
Orientation:
Plus strand

Genomic View for LINC02661 Gene

Genes around LINC02661 on UCSC Golden Path with GeneCards custom track
LINC02661 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Cytogenetic band:
LINC02661 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LINC02661 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LINC02661 Gene

Proteins for LINC02661 Gene

Post-translational modifications for LINC02661 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LINC02661 Gene

Domains & Families for LINC02661 Gene

Gene Families for LINC02661 Gene

genes like me logo Genes that share domains with LINC02661: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LINC02661 Gene

Function for LINC02661 Gene

Phenotypes From GWAS Catalog for LINC02661 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LINC02661 Gene

Localization for LINC02661 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LINC02661 Gene

Pathways & Interactions for LINC02661 Gene

PathCards logo

SuperPathways for LINC02661 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LINC02661 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LINC02661 Gene

Drugs & Compounds for LINC02661 Gene

No Compound Related Data Available

Transcripts for LINC02661 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for LINC02661 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS000015ACDB_9606 lncRNA 480 4

Ensembl: ENST00000421481 (view in UCSC) ,

LncBook: HSALNT0167933,

LNCipedia: lnc-ADD3-3:2,

NONCODE: NONHSAT016308.2,

URS0000EF67D8_9606 lncRNA 523 2

HGNC: 54147,

Ensembl: ENST00000653086 (view in UCSC) ,

URS00008B84F9_9606 lncRNA 330 3

LncBook: HSALNT0167936,

LNCipedia: lnc-ADD3-3:3,

NONCODE: NONHSAT016309.2,

URS00008B36E7_9606 lncRNA 300 3

LncBook: HSALNT0167931,

LNCipedia: lnc-ADD3-3:1,

NONCODE: NONHSAT016307.2,

URS00009BED1F_9606 lncRNA 553 1

NONCODE: NONHSAT156069.1,

LINC02661 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for LINC02661 Gene

No ASD Table

Relevant External Links for LINC02661 Gene

GeneLoc Exon Structure for
LINC02661

No data available for mRNA/cDNA for LINC02661 Gene

Expression for LINC02661 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LINC02661 Gene

Orthologs for LINC02661 Gene

Evolution for LINC02661 Gene

ENSEMBL:
Gene Tree for LINC02661 (if available)
TreeFam:
Gene Tree for LINC02661 (if available)

No data available for Orthologs for LINC02661 Gene

Paralogs for LINC02661 Gene

No data available for Paralogs for LINC02661 Gene

Variants for LINC02661 Gene

Additional dbSNP identifiers (rs#s) for LINC02661 Gene

Additional Variant Information for LINC02661 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
LINC02661

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for LINC02661 Gene

Disorders for LINC02661 Gene

No disorders were found for LINC02661 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LINC02661 Gene

Publications for LINC02661 Gene

No publications were found for LINC02661 Gene.

No data available for Mastermind for LINC02661 Gene

Products for LINC02661 Gene

Sources for LINC02661 Gene