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Aliases for LINC02655 Gene

Subcategory (RNA class) for LINC02655 Gene

non-coding RNA

Quality Score for this RNA gene is

13

Aliases for LINC02655 Gene

  • Long Intergenic Non-Protein Coding RNA 2655 2 3 5

External Ids for LINC02655 Gene

Previous GeneCards Identifiers for LINC02655 Gene

  • GC10P081978

Summaries for LINC02655 Gene

GeneCards Summary for LINC02655 Gene

LINC02655 (Long Intergenic Non-Protein Coding RNA 2655) is an RNA Gene, and is affiliated with the non-coding RNA class.

Additional gene information for LINC02655 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LINC02655 Gene

Genomics for LINC02655 Gene

GeneHancer (GH) Regulatory Elements for LINC02655 Gene

Promoters and enhancers for LINC02655 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH10J080662 Enhancer 0.8 ENCODE 0.4 +13.3 13271 1.1 CTCF RAD21 MTA1 IKZF1 GMEB1 IKZF2 ZNF143 REST TRIM22 HDAC1 TMEM254 LINC02655 GC10M080717
GH10J080663 Enhancer 0.8 ENCODE 0.4 +14.7 14708 0.2 CC2D1A ELF3 CTCF CREM RAD21 IKZF1 CREB1 ARID2 IKZF2 ATF1 LINC02655 GC10M080717
GH10J080684 Enhancer 0.9 Ensembl ENCODE 0.3 +34.8 34849 0.4 SP1 SIX5 CBFA2T2 ZNF143 NFYB USF1 MBD2 ZNF217 HCFC1 USF2 LOC642361 LINC02655 GC10M080717
GH10J080699 Enhancer 0.7 ENCODE 0.2 +50.2 50168 0.2 CC2D1A CTCF MCM2 RAD21 ARID2 IKZF1 ZNF143 REST TRIM22 SOX6 GC10M080717 LINC02655
GH10J080660 Enhancer 0.4 FANTOM5 0.4 +11.4 11380 0.3 CTCF SH2D4B TMEM254 ANXA11 LINC02655 GC10M080717
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LINC02655 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LINC02655 Gene

Genomic Locations for LINC02655 Gene
chr10:80,649,552-80,653,734
(GRCh38/hg38)
Size:
4,183 bases
Orientation:
Plus strand
chr10:82,409,553-82,413,488
(GRCh37/hg19)
Size:
3,936 bases
Orientation:
Plus strand

Genomic View for LINC02655 Gene

Genes around LINC02655 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LINC02655 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LINC02655 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LINC02655 Gene

Proteins for LINC02655 Gene

Post-translational modifications for LINC02655 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LINC02655 Gene

Domains & Families for LINC02655 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LINC02655 Gene

Function for LINC02655 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LINC02655 Gene

Localization for LINC02655 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LINC02655 Gene

Pathways & Interactions for LINC02655 Gene

PathCards logo

SuperPathways for LINC02655 Gene

No Data Available

Interacting Proteins for LINC02655 Gene

Gene Ontology (GO) - Biological Process for LINC02655 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LINC02655 Gene

Drugs & Compounds for LINC02655 Gene

No Compound Related Data Available

Transcripts for LINC02655 Gene

mRNA/cDNA for LINC02655 Gene

(2) Additional mRNA sequences :
(1) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
(2) RNA Central transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for LINC02655 Gene

No ASD Table

Relevant External Links for LINC02655 Gene

GeneLoc Exon Structure for
LINC02655
ECgene alternative splicing isoforms for
LINC02655

Expression for LINC02655 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LINC02655 Gene

Orthologs for LINC02655 Gene

Evolution for LINC02655 Gene

ENSEMBL:
Gene Tree for LINC02655 (if available)
TreeFam:
Gene Tree for LINC02655 (if available)

No data available for Orthologs for LINC02655 Gene

Paralogs for LINC02655 Gene

No data available for Paralogs for LINC02655 Gene

Variants for LINC02655 Gene

Sequence variations from dbSNP and Humsavar for LINC02655 Gene

SNP ID Clin Chr 10 pos Variation AA Info Type
rs1000440794 -- 80,648,865(+) A/G upstream_transcript_variant
rs1000653041 -- 80,649,420(+) TGT/T upstream_transcript_variant
rs1000696471 -- 80,648,283(+) C/G upstream_transcript_variant
rs1000724186 -- 80,654,124(+) G/T downstream_transcript_variant
rs1001109522 -- 80,653,066(+) G/A intron_variant

Additional Variant Information for LINC02655 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
LINC02655

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for LINC02655 Gene

Disorders for LINC02655 Gene

No disorders were found for LINC02655 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LINC02655 Gene

Publications for LINC02655 Gene

No publications were found for LINC02655 Gene.

No data available for External Links for LINC02655 Gene

Products for LINC02655 Gene

Sources for LINC02655 Gene

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