Aliases for LINC02651 Gene

Data sources for LINC02651 Gene:

RNA type for LINC02651 Gene

lncRNA

Aliases for LINC02651 Gene

External Ids for LINC02651 Gene

Summaries for LINC02651 Gene

GeneCards Summary for LINC02651 Gene

LINC02651 (Long Intergenic Non-Protein Coding RNA 2651) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for LINC02651 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LINC02651 Gene

Genomics for LINC02651 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for LINC02651 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH10J069683 Enhancer 1.2 Ensembl ENCODE CraniofacialAtlas dbSUPER 0.4 +18.3 18320 4.5 ATF3 YY1 RXRA ZBTB33 ZSCAN9 JUND HNF4A FOXA1 RAD21 TFAP4 HSALNG0078603 FAM241B HSALNG0078600 lnc-NEUROG3-7 LINC02651 COL13A1
GH10J069663 Enhancer 0.6 Ensembl ENCODE 0.7 -3.5 -3516 0.6 MCM7 CTCF HNF4A ZNF143 ESRRA FAM241B LINC02651 HSALNG0078599 COL13A1
GH10J069655 Enhancer 0.9 Ensembl ENCODE CraniofacialAtlas 0.4 -11.2 -11225 4 ZIC2 ZNF316 MAFG GLIS1 ZNF398 MAFK RAD21 EGR2 BACH1 SCRT2 FAM241B HSALNG0078599 LINC02651 COL13A1
GH10J069695 Enhancer 0.9 Ensembl ENCODE 0.3 +28.9 28938 1.2 ATF2 REST CTCF ELF1 FOXA2 RAD21 SMC3 JUND ATF1 FOXA1 CCAR1 SAR1A DDX50 COL13A1 FAM241B HSALNG0078603 HSALNG0078604 LINC02651
GH10J069717 Enhancer 0.8 ENCODE dbSUPER 0.3 +49.9 49883 0.2 ZNF654 REST CTCF RAD21 SMC3 YY1 EBF1 ZNF143 PRDM4 TRIM22 HSALNG0078604 LINC02651 RPL5P26 COL13A1 FAM241B
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LINC02651 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for LINC02651 Gene

Latest Assembly
chr10:69,667,227-69,718,243
(GRCh38/hg38)
Size:
51,017 bases
Orientation:
Plus strand

Previous Assembly
chr10:71,444,655-71,452,208
(GRCh37/hg19 by Ensembl)
Size:
7,554 bases
Orientation:
Plus strand

Genomic View for LINC02651 Gene

Genes around LINC02651 on UCSC Golden Path with GeneCards custom track
LINC02651 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Cytogenetic band:
LINC02651 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LINC02651 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LINC02651 Gene

Proteins for LINC02651 Gene

Post-translational modifications for LINC02651 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LINC02651 Gene

Domains & Families for LINC02651 Gene

Gene Families for LINC02651 Gene

genes like me logo Genes that share domains with LINC02651: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LINC02651 Gene

Function for LINC02651 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LINC02651 Gene

Localization for LINC02651 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LINC02651 Gene

Pathways & Interactions for LINC02651 Gene

PathCards logo

SuperPathways for LINC02651 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LINC02651 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LINC02651 Gene

Drugs & Compounds for LINC02651 Gene

No Compound Related Data Available

Transcripts for LINC02651 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for LINC02651 Gene

RNAcentral Transcript ID RNA Type Length (nts) # of Sources Source Identifiers and Annotations
URS00007E18FF_9606 lncRNA 576 4

Ensembl: ENST00000434931 (view in UCSC) ,

LncBook: HSALNT0163981,

LNCipedia: lnc-FAM241B-2:3,

NONCODE: NONHSAT155619.1,

URS00008BDFD4_9606 lncRNA 3051 3

LncBook: HSALNT0163977,

LNCipedia: lnc-FAM241B-2:2,

NONCODE: NONHSAT013814.2,

URS00008B43E6_9606 lncRNA 1906 3

LncBook: HSALNT0163976,

LNCipedia: lnc-FAM241B-2:1,

NONCODE: NONHSAT013813.2,

URS0000EB0044_9606 lncRNA 7750 1

LncBook: HSALNT0163982,

URS0001BE08CD_9606 lncRNA 7750 1

LncBook: HSALNT0163982,

LINC02651 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for LINC02651 Gene

No ASD Table

Relevant External Links for LINC02651 Gene

GeneLoc Exon Structure for
LINC02651

No data available for mRNA/cDNA for LINC02651 Gene

Expression for LINC02651 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LINC02651 Gene

Orthologs for LINC02651 Gene

Evolution for LINC02651 Gene

ENSEMBL:
Gene Tree for LINC02651 (if available)
TreeFam:
Gene Tree for LINC02651 (if available)
Alliance of Genome Resources:
Additional Orthologs for LINC02651

No data available for Orthologs for LINC02651 Gene

Paralogs for LINC02651 Gene

No data available for Paralogs for LINC02651 Gene

Variants for LINC02651 Gene

dbSNP identifiers (rs#s) for variants without ClinVar clinical significance for LINC02651 Gene

All consequence types are included: molecular consequences (e.g. missense, synonymous), and location-based (e.g. intron, upstream).

Additional Variant Information for LINC02651 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
LINC02651
Leiden Open Variation Database (LOVD)
LINC02651

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for LINC02651 Gene

Disorders for LINC02651 Gene

No disorders were found for LINC02651 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LINC02651 Gene

Publications for LINC02651 Gene

No publications were found for LINC02651 Gene.

No data available for Mastermind for LINC02651 Gene

Products for LINC02651 Gene

Sources for LINC02651 Gene