Aliases for LINC02641 Gene

Subcategory (RNA class) for LINC02641 Gene

lncRNA

Number of RNA Genes sources:

3 / 14

Aliases for LINC02641 Gene

  • Long Intergenic Non-Protein Coding RNA 2641 2 3 5
  • HSALNG0081287 167
  • HSALNG0081301 167
  • NONHSAG007089 92
  • NONHSAG007093 92
  • HSALNG0081281 167
  • Lnc-BUB3-4 168
  • LINC02641 2

External Ids for LINC02641 Gene

Previous GeneCards Identifiers for LINC02641 Gene

  • GC10P123353

Summaries for LINC02641 Gene

GeneCards Summary for LINC02641 Gene

LINC02641 (Long Intergenic Non-Protein Coding RNA 2641) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for LINC02641 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LINC02641 Gene

Genomics for LINC02641 Gene

GeneHancer (GH) Regulatory Elements for LINC02641 Gene

Promoters and enhancers for LINC02641 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH10J123253 Enhancer 0.3 UCNEbase 500.7 -0.5 -488 0.4 LINC02641 HSALNG0081278 lnc-IKZF5-4
GH10J123254 Enhancer 0.3 Ensembl 500.7 -0.8 -843 0.2 FOXA1 LINC02641 HSALNG0081278 lnc-IKZF5-4
GH10J123318 Enhancer 0.3 Ensembl 5.9 +65.0 64957 0.6 EGR2 RUNX3 LINC02641 ENSG00000270902 piR-58297-064 lnc-IKZF5-4
GH10J123250 Enhancer 0.5 Ensembl 0.7 -3.2 -3243 0.2 OSR2 NR3C1 FEZF1 SCRT2 ESR1 EZH2 LINC02641 HSALNG0081278 lnc-IKZF5-4
GH10J123241 Enhancer 0.7 Ensembl ENCODE 0.4 -12.1 -12144 2.8 NFYB CREB1 RFX5 ZNF513 GABPA RARA HNF4A SPI1 CREM RFXANK HSALNG0081278 LINC02641 lnc-IKZF5-4
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LINC02641 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LINC02641 Gene

Genomic Locations for LINC02641 Gene
chr10:123,253,944-123,562,374
(GRCh38/hg38)
Size:
308,431 bases
Orientation:
Plus strand
chr10:125,115,966-125,277,224
(GRCh37/hg19)
Size:
161,259 bases
Orientation:
Plus strand

Genomic View for LINC02641 Gene

Genes around LINC02641 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LINC02641 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LINC02641 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LINC02641 Gene

Proteins for LINC02641 Gene

Post-translational modifications for LINC02641 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LINC02641 Gene

Domains & Families for LINC02641 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LINC02641 Gene

Function for LINC02641 Gene

Phenotypes From GWAS Catalog for LINC02641 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LINC02641 Gene

Localization for LINC02641 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LINC02641 Gene

Pathways & Interactions for LINC02641 Gene

PathCards logo

SuperPathways for LINC02641 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for LINC02641 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LINC02641 Gene

Drugs & Compounds for LINC02641 Gene

No Compound Related Data Available

Transcripts for LINC02641 Gene

mRNA/cDNA for LINC02641 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LINC02641 Gene

No ASD Table

Relevant External Links for LINC02641 Gene

GeneLoc Exon Structure for
LINC02641

Expression for LINC02641 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LINC02641 Gene

Orthologs for LINC02641 Gene

Evolution for LINC02641 Gene

ENSEMBL:
Gene Tree for LINC02641 (if available)
TreeFam:
Gene Tree for LINC02641 (if available)

No data available for Orthologs for LINC02641 Gene

Paralogs for LINC02641 Gene

No data available for Paralogs for LINC02641 Gene

Variants for LINC02641 Gene

Additional dbSNP identifiers (rs#s) for LINC02641 Gene

Additional Variant Information for LINC02641 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
LINC02641

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for LINC02641 Gene

Disorders for LINC02641 Gene

No disorders were found for LINC02641 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LINC02641 Gene

Publications for LINC02641 Gene

No publications were found for LINC02641 Gene.

No data available for Mastermind for LINC02641 Gene

Products for LINC02641 Gene

Sources for LINC02641 Gene