Aliases for LINC02637 Gene

Subcategory (RNA class) for LINC02637 Gene

lncRNA

Number of RNA Genes sources:

1 / 17

Aliases for LINC02637 Gene

  • Long Intergenic Non-Protein Coding RNA 2637 2 3 5
  • LINC02637 2 5
  • Lnc-SYT15-3 165

External Ids for LINC02637 Gene

Summaries for LINC02637 Gene

GeneCards Summary for LINC02637 Gene

LINC02637 (Long Intergenic Non-Protein Coding RNA 2637) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for LINC02637 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LINC02637 Gene

Genomics for LINC02637 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for LINC02637 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH10J046585 Enhancer 1.2 Ensembl ENCODE dbSUPER 5.8 -42.4 -42371 6.2 RNF2 CREB1 CTCF YBX1 TFE3 ZNF512 NFKBIZ PRDM1 RXRB PATZ1 piR-34822-041 piR-47861-001 piR-48119-001 WASHC2C PARGP1 LINC02637 ZFAND4 RHEBP1 ENSG00000228702 SYT15
GH10J046634 Promoter 0.6 Ensembl 0.4 +6.2 6210 2.2 PRDM10 SMARCA4 ZBTB40 L3MBTL2 RNF2 GMEB1 RHEBP1 lnc-GPRIN2-2 LINC02637 SHLD2P1 SYT15 PTPN20
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LINC02637 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for LINC02637 Gene

Genomic Locations for LINC02637 Gene
chr10:46,629,291-46,635,472
(GRCh38/hg38)
Size:
6,182 bases
Orientation:
Plus strand

Genomic View for LINC02637 Gene

Genes around LINC02637 on UCSC Golden Path with GeneCards custom track
LINC02637 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Cytogenetic band:
LINC02637 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LINC02637 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LINC02637 Gene

Proteins for LINC02637 Gene

Post-translational modifications for LINC02637 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LINC02637 Gene

Domains & Families for LINC02637 Gene

Gene Families for LINC02637 Gene

genes like me logo Genes that share domains with LINC02637: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LINC02637 Gene

Function for LINC02637 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LINC02637 Gene

Localization for LINC02637 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LINC02637 Gene

Pathways & Interactions for LINC02637 Gene

PathCards logo

SuperPathways for LINC02637 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LINC02637 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LINC02637 Gene

Drugs & Compounds for LINC02637 Gene

No Compound Related Data Available

Transcripts for LINC02637 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for LINC02637 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS0000546BEB_9606 lncRNA 551 3

HGNC: 54120,

Ensembl: ENST00000605984 (view in UCSC) ,

LNCipedia: lnc-SYT15-3:1,

LINC02637 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for LINC02637 Gene

No ASD Table

Relevant External Links for LINC02637 Gene

GeneLoc Exon Structure for
LINC02637

No data available for mRNA/cDNA for LINC02637 Gene

Expression for LINC02637 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LINC02637 Gene

Orthologs for LINC02637 Gene

Evolution for LINC02637 Gene

ENSEMBL:
Gene Tree for LINC02637 (if available)
TreeFam:
Gene Tree for LINC02637 (if available)

No data available for Orthologs for LINC02637 Gene

Paralogs for LINC02637 Gene

No data available for Paralogs for LINC02637 Gene

Variants for LINC02637 Gene

Additional dbSNP identifiers (rs#s) for LINC02637 Gene

Additional Variant Information for LINC02637 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
LINC02637

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for LINC02637 Gene

Disorders for LINC02637 Gene

Additional Disease Information for LINC02637

No disorders were found for LINC02637 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for LINC02637 Gene

Publications for LINC02637 Gene

No publications were found for LINC02637 Gene.

No data available for Mastermind for LINC02637 Gene

Products for LINC02637 Gene

Sources for LINC02637 Gene