Aliases for LINC02636 Gene

Data sources for LINC02636 Gene:

RNA type for LINC02636 Gene

lncRNA

Aliases for LINC02636 Gene

External Ids for LINC02636 Gene

Previous GeneCards Identifiers for LINC02636 Gene

  • GC10M069997
  • GC10M069998
  • GC10M070007
  • GC10M070016
  • GC10M070028

Summaries for LINC02636 Gene

GeneCards Summary for LINC02636 Gene

LINC02636 (Long Intergenic Non-Protein Coding RNA 2636) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for LINC02636 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LINC02636 Gene

Genomics for LINC02636 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for LINC02636 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH10J070016 Enhancer 0.3 Ensembl 250.7 +0.1 80 1.2 KLF1 LINC02636 SUPV3L1 HSALNG0078616 MACROH2A2 COL13A1 MK280269-008
GH10J069213 Enhancer 1.4 FANTOM5 ENCODE dbSUPER 10 +803.8 803812 5.3 NCOR1 ZNF600 IKZF1 MYC ZNF592 ATF2 CEBPA ZNF10 BRCA1 NFIC HKDC1 LINC02636 ENSG00000231748 HK1 TYSND1 SUPV3L1 SRGN VPS26A DDX21 RF01045-019
GH10J070052 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE CraniofacialAtlas 5.9 -33.4 -33364 3.6 ZNF600 ZNF580 CEBPA POLR2A ZIC2 ZBTB10 YY1 MXD4 KLF11 ZNF341 MACROH2A2 LINC02636 HSALNG0078619 AIFM2 MK280269-008
GH10J069303 Enhancer 0.8 Ensembl 10 +716.1 716077 0.9 ZNF654 ZNF580 ZNF223 NFIC ZEB1 KLF7 ZNF623 ZNF433 ZNF189 ZFP37 CCAR1 DDX50 HNRNPH3 TYSND1 SAR1A RPL26P27 SUPV3L1 NPFFR1 VPS26A LINC02636
GH10J070040 Enhancer 0.3 Ensembl 5.4 -21.8 -21829 1.8 ZNF366 SREBF1 LINC02636 MACROH2A2 lnc-AIFM2-2 COL13A1 MK280269-008
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LINC02636 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for LINC02636 Gene

Latest Assembly
chr10:69,993,790-70,019,881
(GRCh38/hg38)
Size:
26,092 bases
Orientation:
Minus strand

Previous Assembly
chr10:71,754,382-71,767,592
(GRCh37/hg19 by Ensembl)
Size:
13,211 bases
Orientation:
Minus strand

Genomic View for LINC02636 Gene

Genes around LINC02636 on UCSC Golden Path with GeneCards custom track
LINC02636 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Cytogenetic band:
LINC02636 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LINC02636 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LINC02636 Gene

Proteins for LINC02636 Gene

Post-translational modifications for LINC02636 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LINC02636 Gene

Domains & Families for LINC02636 Gene

Gene Families for LINC02636 Gene

genes like me logo Genes that share domains with LINC02636: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LINC02636 Gene

Function for LINC02636 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LINC02636 Gene

Localization for LINC02636 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LINC02636 Gene

Pathways & Interactions for LINC02636 Gene

PathCards logo

SuperPathways for LINC02636 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LINC02636 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LINC02636 Gene

Drugs & Compounds for LINC02636 Gene

No Compound Related Data Available

Transcripts for LINC02636 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for LINC02636 Gene

RNAcentral Transcript ID RNA Type Length (nts) # of Sources Source Identifiers and Annotations
URS000056C404_9606 lncRNA 524 3

Ensembl: ENST00000427247 (view in UCSC) ,

LNCipedia: lnc-AIFM2-1:2,

NONCODE: NONHSAT013820.2,

URS0000EF6F36_9606 lncRNA 1323 1

Ensembl: ENST00000653732 (view in UCSC) ,

URS0000EF148D_9606 lncRNA 1201 1

Ensembl: ENST00000655496 (view in UCSC) ,

URS0000EF57A6_9606 lncRNA 1097 1

Ensembl: ENST00000659203 (view in UCSC) ,

URS0000EF4010_9606 lncRNA 705 1

Ensembl: ENST00000667615 (view in UCSC) ,

LINC02636 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for LINC02636 Gene

No ASD Table

Relevant External Links for LINC02636 Gene

GeneLoc Exon Structure for
LINC02636

No data available for mRNA/cDNA for LINC02636 Gene

Expression for LINC02636 Gene

Transcriptomic regulation report from SPP (The Signaling Pathways Project) for LINC02636

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LINC02636 Gene

Orthologs for LINC02636 Gene

Evolution for LINC02636 Gene

ENSEMBL:
Gene Tree for LINC02636 (if available)
TreeFam:
Gene Tree for LINC02636 (if available)
Alliance of Genome Resources:
Additional Orthologs for LINC02636

No data available for Orthologs for LINC02636 Gene

Paralogs for LINC02636 Gene

No data available for Paralogs for LINC02636 Gene

Variants for LINC02636 Gene

dbSNP identifiers (rs#s) for variants without ClinVar clinical significance for LINC02636 Gene

All consequence types are included: molecular consequences (e.g. missense, synonymous), and location-based (e.g. intron, upstream).

Additional Variant Information for LINC02636 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
LINC02636
Leiden Open Variation Database (LOVD)
LINC02636

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for LINC02636 Gene

Disorders for LINC02636 Gene

No disorders were found for LINC02636 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LINC02636 Gene

Publications for LINC02636 Gene

No publications were found for LINC02636 Gene.

No data available for Mastermind for LINC02636 Gene

Products for LINC02636 Gene

Sources for LINC02636 Gene