Aliases for LINC02635 Gene

Subcategory (RNA class) for LINC02635 Gene

lncRNA

Quality Score for this RNA gene is

13

Aliases for LINC02635 Gene

  • Long Intergenic Non-Protein Coding RNA 2635 2 3 5
  • HSALNG0077258 169
  • Lnc-CREM-7 170

External Ids for LINC02635 Gene

Summaries for LINC02635 Gene

GeneCards Summary for LINC02635 Gene

LINC02635 (Long Intergenic Non-Protein Coding RNA 2635) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for LINC02635 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LINC02635 Gene

Genomics for LINC02635 Gene

GeneHancer (GH) Regulatory Elements for LINC02635 Gene

Promoters and enhancers for LINC02635 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH10J034969 Enhancer 0.2 FANTOM5 750.6 -0.6 -596 0.2 LINC02635 CREM PRDX2P2 lnc-CREM-2
GH10J034973 Promoter/Enhancer 0.9 Ensembl ENCODE 0.6 +4.2 4212 1 CTCF ZNF217 MNT CREB1 CTBP1 ZNF512B PKNOX1 DPF2 NFIB SIN3A piR-50308-045 CREM PARD3-AS1 LINC02635
GH10J034967 Enhancer 0.4 Ensembl ENCODE 0.6 -2.4 -2380 1 NR2F2 LINC02635 PRDX2P2 lnc-CREM-2
GH10J034966 Enhancer 0.3 Ensembl 0.6 -3.5 -3480 0.8 ELF3 GATA3 PRDX2P2 lnc-CREM-2 ENSG00000271335 LINC02635
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LINC02635 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LINC02635 Gene

Genomic Locations for LINC02635 Gene
chr10:34,969,881-34,975,578
(GRCh38/hg38)
Size:
5,698 bases
Orientation:
Plus strand

Genomic View for LINC02635 Gene

Genes around LINC02635 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LINC02635 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LINC02635 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LINC02635 Gene

Proteins for LINC02635 Gene

Post-translational modifications for LINC02635 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LINC02635 Gene

Domains & Families for LINC02635 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LINC02635 Gene

Function for LINC02635 Gene

Phenotypes From GWAS Catalog for LINC02635 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LINC02635 Gene

Localization for LINC02635 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LINC02635 Gene

Pathways & Interactions for LINC02635 Gene

PathCards logo

SuperPathways for LINC02635 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LINC02635 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LINC02635 Gene

Drugs & Compounds for LINC02635 Gene

No Compound Related Data Available

Transcripts for LINC02635 Gene

mRNA/cDNA for LINC02635 Gene

(3) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
(2) RNACentral transcripts :
(2) LNCipedia transcripts :
(2) LncBook transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for LINC02635 Gene

No ASD Table

Relevant External Links for LINC02635 Gene

GeneLoc Exon Structure for
LINC02635
ECgene alternative splicing isoforms for
LINC02635

Expression for LINC02635 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LINC02635 Gene

Orthologs for LINC02635 Gene

Evolution for LINC02635 Gene

ENSEMBL:
Gene Tree for LINC02635 (if available)
TreeFam:
Gene Tree for LINC02635 (if available)

No data available for Orthologs for LINC02635 Gene

Paralogs for LINC02635 Gene

No data available for Paralogs for LINC02635 Gene

Variants for LINC02635 Gene

Sequence variations from dbSNP and Humsavar for LINC02635 Gene

SNP ID Clin Chr 10 pos Variation AA Info Type
rs1000343285 -- 34,972,265(+) G/A upstream_transcript_variant
rs1000611349 -- 34,971,160(+) G/C upstream_transcript_variant
rs1000786586 -- 34,975,940(+) C/T downstream_transcript_variant
rs1001550453 -- 34,971,318(+) G/A/C upstream_transcript_variant
rs1002996781 -- 34,975,863(+) AAAAAAAA/AAAAAAA/AAAAAAAAA downstream_transcript_variant

Additional Variant Information for LINC02635 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
LINC02635

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for LINC02635 Gene

Disorders for LINC02635 Gene

No disorders were found for LINC02635 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LINC02635 Gene

Publications for LINC02635 Gene

No publications were found for LINC02635 Gene.

No data available for External Links for LINC02635 Gene

Products for LINC02635 Gene

Sources for LINC02635 Gene