Aliases for LINC02631 Gene

Data sources for LINC02631 Gene:

RNA type for LINC02631 Gene

lncRNA

Aliases for LINC02631 Gene

External Ids for LINC02631 Gene

Summaries for LINC02631 Gene

GeneCards Summary for LINC02631 Gene

LINC02631 (Long Intergenic Non-Protein Coding RNA 2631) is an RNA Gene, and is affiliated with the lncRNA class. Diseases associated with LINC02631 include Retinitis Pigmentosa 11 and Retinitis Pigmentosa.

Additional gene information for LINC02631 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LINC02631 Gene

Genomics for LINC02631 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for LINC02631 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH02J138596 Enhancer 0.2 Ensembl 250.7 +1.7 1686 0.6 LINC02631 ENSG00000228043 SPOPL HSALNG0019177 NXPH2
GH02J138601 Enhancer 0.7 Ensembl ENCODE 0.4 +6.9 6877 1.8 ATF2 JUND ZBTB21 JUN CREB1 ZNF629 POLR2A ATF7 CTCF ENSG00000260059 HSALNG0019178 HSALNG0019177 LINC02631 SPOPL NXPH2
GH02J138607 Enhancer 0.3 Ensembl 0.4 +13.0 12987 1.2 POLR2A HSALNG0019179 LINC02631 HSALNG0019180 SPOPL NXPH2
GH02J138615 Enhancer 0.2 ENCODE 0.4 +20.5 20452 0.2 HSALNG0019179 LINC02631 HSALNG0019180 SPOPL NXPH2
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LINC02631 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for LINC02631 Gene

Latest Assembly
chr2:138,595,014-138,617,469
(GRCh38/hg38)
Size:
22,456 bases
Orientation:
Plus strand

Previous Assembly
chr2:139,362,080-139,370,737
(GRCh37/hg19 by Ensembl)
Size:
8,658 bases
Orientation:
Plus strand

Genomic View for LINC02631 Gene

Genes around LINC02631 on UCSC Golden Path with GeneCards custom track
LINC02631 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Cytogenetic band:
LINC02631 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LINC02631 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for LINC02631 Gene

Proteins for LINC02631 Gene

Post-translational modifications for LINC02631 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LINC02631 Gene

Domains & Families for LINC02631 Gene

Gene Families for LINC02631 Gene

genes like me logo Genes that share domains with LINC02631: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LINC02631 Gene

Function for LINC02631 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LINC02631 Gene

Localization for LINC02631 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LINC02631 Gene

Pathways & Interactions for LINC02631 Gene

PathCards logo

SuperPathways for LINC02631 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LINC02631 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LINC02631 Gene

Drugs & Compounds for LINC02631 Gene

No Compound Related Data Available

Transcripts for LINC02631 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for LINC02631 Gene

RNAcentral Transcript ID RNA Type Length (nts) # of Sources Source Identifiers and Annotations
URS0000EEF8C2_9606 lncRNA 1607 1

Ensembl: ENST00000661346 (view in UCSC) ,

URS0000EEE30E_9606 lncRNA 1557 1

Ensembl: ENST00000664633 (view in UCSC) ,

URS0000EF726C_9606 lncRNA 1504 1

Ensembl: ENST00000453636 (view in UCSC) ,

URS0000EEF85C_9606 lncRNA 1450 1

Ensembl: ENST00000665886 (view in UCSC) ,

URS0000EF2356_9606 lncRNA 1389 1

Ensembl: ENST00000669466 (view in UCSC) ,

LINC02631 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for LINC02631 Gene

No ASD Table

Relevant External Links for LINC02631 Gene

GeneLoc Exon Structure for
LINC02631

No data available for mRNA/cDNA for LINC02631 Gene

Expression for LINC02631 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LINC02631 Gene

Orthologs for LINC02631 Gene

Evolution for LINC02631 Gene

ENSEMBL:
Gene Tree for LINC02631 (if available)
TreeFam:
Gene Tree for LINC02631 (if available)
Alliance of Genome Resources:
Additional Orthologs for LINC02631

No data available for Orthologs for LINC02631 Gene

Paralogs for LINC02631 Gene

No data available for Paralogs for LINC02631 Gene

Variants for LINC02631 Gene

Additional Variant Information for LINC02631 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
LINC02631
Leiden Open Variation Database (LOVD)
LINC02631

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , dbSNP identifiers (rs#s) for variants without ClinVar clinical significance , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for LINC02631 Gene

Disorders for LINC02631 Gene

MalaCards: The human disease database

(2) MalaCards diseases for LINC02631 Gene - From: COP

Disorder Aliases PubMed IDs
retinitis pigmentosa 11
  • rp11
retinitis pigmentosa
  • rp
- elite association - COSMIC cancer census association via MalaCards
genes like me logo Genes that share disorders with LINC02631: view

No data available for UniProtKB/Swiss-Prot , Genatlas and External Links for LINC02631 Gene

Publications for LINC02631 Gene

  1. LncRNA expression profiling and its relationship with DNA damage in Cr(VI)-treated 16HBE cells. (PMID: 30476843) Hu G … Jia G (The Science of the total environment 2019) 2 3

Products for LINC02631 Gene

Sources for LINC02631 Gene