Aliases for LINC02629 Gene

Subcategory (RNA class) for LINC02629 Gene

lncRNA

Quality Score for this RNA gene is

13

Aliases for LINC02629 Gene

  • Long Intergenic Non-Protein Coding RNA 2629 2 3 5
  • TCONS_00017811 3
  • NONHSAG005596 94
  • Lnc-CCDC7-21 170

External Ids for LINC02629 Gene

Summaries for LINC02629 Gene

GeneCards Summary for LINC02629 Gene

LINC02629 (Long Intergenic Non-Protein Coding RNA 2629) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for LINC02629 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LINC02629 Gene

Genomics for LINC02629 Gene

GeneHancer (GH) Regulatory Elements for LINC02629 Gene

Promoters and enhancers for LINC02629 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH10J033899 Enhancer 0.9 Ensembl ENCODE 0.4 -8.8 -8785 2.9 FOXA1 RBPJ MIXL1 RAD21 ZNF652 SP1 CEBPG ZNF644 CEBPA RXRA LINC02629 HSALNG0077221
GH10J033913 Enhancer 0.3 Ensembl 0.6 +4.3 4262 0.2 FOS JUND LINC02629 piR-38351-041 HSALNG0077224
GH10J033896 Enhancer 0.4 Ensembl ENCODE 0.4 -11.8 -11819 1.5 MAFK LINC02629 HSALNG0077221
GH10J033892 Enhancer 0.2 ENCODE 0.4 -15.9 -15870 1.6 HSALNG0077221 LINC02629
GH10J033879 Enhancer 0.2 Ensembl 0.3 -28.3 -28337 0.6 HSALNG0077221 LINC02629
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LINC02629 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LINC02629 Gene

Genomic Locations for LINC02629 Gene
chr10:33,909,238-33,917,804
(GRCh38/hg38)
Size:
8,567 bases
Orientation:
Plus strand
chr10:34,198,166-34,206,723
(GRCh37/hg19)
Size:
8,558 bases
Orientation:
Plus strand

Genomic View for LINC02629 Gene

Genes around LINC02629 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LINC02629 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LINC02629 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for LINC02629 Gene

Proteins for LINC02629 Gene

Post-translational modifications for LINC02629 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LINC02629 Gene

Domains & Families for LINC02629 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LINC02629 Gene

Function for LINC02629 Gene

Phenotypes From GWAS Catalog for LINC02629 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LINC02629 Gene

Localization for LINC02629 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LINC02629 Gene

Pathways & Interactions for LINC02629 Gene

PathCards logo

SuperPathways for LINC02629 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LINC02629 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LINC02629 Gene

Drugs & Compounds for LINC02629 Gene

No Compound Related Data Available

Transcripts for LINC02629 Gene

mRNA/cDNA for LINC02629 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
(2) RNACentral transcripts :
(2) LNCipedia transcripts :
(1) NONCODE transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for LINC02629 Gene

No ASD Table

Relevant External Links for LINC02629 Gene

GeneLoc Exon Structure for
LINC02629
ECgene alternative splicing isoforms for
LINC02629

Expression for LINC02629 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LINC02629 Gene

Orthologs for LINC02629 Gene

Evolution for LINC02629 Gene

ENSEMBL:
Gene Tree for LINC02629 (if available)
TreeFam:
Gene Tree for LINC02629 (if available)

No data available for Orthologs for LINC02629 Gene

Paralogs for LINC02629 Gene

No data available for Paralogs for LINC02629 Gene

Variants for LINC02629 Gene

Additional Variant Information for LINC02629 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
LINC02629

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for LINC02629 Gene

Disorders for LINC02629 Gene

No disorders were found for LINC02629 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LINC02629 Gene

Publications for LINC02629 Gene

No publications were found for LINC02629 Gene.

No data available for External Links for LINC02629 Gene

Products for LINC02629 Gene

Sources for LINC02629 Gene