Aliases for LINC02628 Gene

Subcategory (RNA class) for LINC02628 Gene


Quality Score for this RNA gene is


Aliases for LINC02628 Gene

  • Long Intergenic Non-Protein Coding RNA 2628 2 3 5
  • NONHSAG005590 94
  • HSALNG0077208 169
  • Lnc-NRP1-3 170

External Ids for LINC02628 Gene

Summaries for LINC02628 Gene

GeneCards Summary for LINC02628 Gene

LINC02628 (Long Intergenic Non-Protein Coding RNA 2628) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for LINC02628 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LINC02628 Gene

Genomics for LINC02628 Gene

GeneHancer (GH) Regulatory Elements for LINC02628 Gene

Promoters and enhancers for LINC02628 Gene
GeneHancer (GH) Identifier GH Type GH
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH10J033326 Enhancer 0.9 dbSUPER 14.6 +273.2 273218 1.1 ZBTB6 NR2F6 CREB1 MIXL1 ZNF121 BCL6B CEBPG SP7 PKNOX1 ZIC2 LINC02628 LINC00838 CCDC7 NRP1 RF00017-649
GH10J033612 Enhancer 0.6 ENCODE 0.4 -12.6 -12599 0.8 ZNF24 RAD21 SP1 IKZF1 CEBPA RXRA JUND ATF3 YY1 HNF4A LINC02628 lnc-NRP1-7
GH10J033566 Enhancer 0.7 Ensembl ENCODE 0.3 +33.8 33841 2 ZNF316 RCOR1 ETS1 IKZF1 MAFK NANOG lnc-CCDC7-17 LINC02628 piR-41245-037
GH10J033570 Enhancer 0.5 Ensembl ENCODE 0.3 +29.4 29440 4 MAFK CEBPB lnc-CCDC7-17 LINC02628 piR-41245-037
GH10J033559 Enhancer 0.6 Ensembl 0.3 +40.5 40541 0.2 MLLT1 IKZF1 POLR2A IKZF2 PKNOX1 DPF2 ELF1 BCL11A RUNX3 BMI1 lnc-CCDC7-17 piR-41245-037 LINC02628
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LINC02628 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LINC02628 Gene

Genomic Locations for LINC02628 Gene
46,459 bases
Minus strand
21,110 bases
Minus strand

Genomic View for LINC02628 Gene

Genes around LINC02628 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LINC02628 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LINC02628 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LINC02628 Gene

Proteins for LINC02628 Gene

Post-translational modifications for LINC02628 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LINC02628 Gene

Domains & Families for LINC02628 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LINC02628 Gene

Function for LINC02628 Gene

Phenotypes From GWAS Catalog for LINC02628 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LINC02628 Gene

Localization for LINC02628 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LINC02628 Gene

Pathways & Interactions for LINC02628 Gene

PathCards logo

SuperPathways for LINC02628 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LINC02628 Gene


No data available for Pathways by source and SIGNOR curated interactions for LINC02628 Gene

Drugs & Compounds for LINC02628 Gene

No Compound Related Data Available

Transcripts for LINC02628 Gene

mRNA/cDNA for LINC02628 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
(3) RNACentral transcripts :
(2) LncBook transcripts :
(3) NONCODE transcripts :
(1) LNCipedia transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for LINC02628 Gene

No ASD Table

Relevant External Links for LINC02628 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for LINC02628 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LINC02628 Gene

Orthologs for LINC02628 Gene

Evolution for LINC02628 Gene

Gene Tree for LINC02628 (if available)
Gene Tree for LINC02628 (if available)

No data available for Orthologs for LINC02628 Gene

Paralogs for LINC02628 Gene

No data available for Paralogs for LINC02628 Gene

Variants for LINC02628 Gene

Sequence variations from dbSNP and Humsavar for LINC02628 Gene

SNP ID Clin Chr 10 pos Variation AA Info Type
rs1000061460 -- 33,592,256(-) G/A intron_variant
rs1000274504 -- 33,592,958(-) C/T intron_variant
rs1000871280 -- 33,588,050(-) G/C/T intron_variant
rs1001005182 -- 33,587,852(-) G/A intron_variant
rs1001116830 -- 33,593,160(-) G/A intron_variant

Additional Variant Information for LINC02628 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for LINC02628 Gene

Disorders for LINC02628 Gene

No disorders were found for LINC02628 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LINC02628 Gene

Publications for LINC02628 Gene

No publications were found for LINC02628 Gene.

No data available for External Links for LINC02628 Gene

Products for LINC02628 Gene

Sources for LINC02628 Gene