Aliases for LINC02606 Gene

Data sources for LINC02606 Gene:

RNA type for LINC02606 Gene

lncRNA

Aliases for LINC02606 Gene

External Ids for LINC02606 Gene

Previous GeneCards Identifiers for LINC02606 Gene

  • GC01M009425

Summaries for LINC02606 Gene

GeneCards Summary for LINC02606 Gene

LINC02606 (Long Intergenic Non-Protein Coding RNA 2606) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for LINC02606 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LINC02606 Gene

Genomics for LINC02606 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for LINC02606 Gene
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LINC02606 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for LINC02606 Gene

Latest Assembly
chr1:9,410,349-9,450,250
(GRCh38/hg38)
Size:
39,902 bases
Orientation:
Minus strand

Previous Assembly
chr1:9,485,153-9,489,055
(GRCh37/hg19 by Entrez Gene)
Size:
3,903 bases
Orientation:
Minus strand

Genomic View for LINC02606 Gene

Genes around LINC02606 on UCSC Golden Path with GeneCards custom track
LINC02606 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Cytogenetic band:
LINC02606 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LINC02606 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LINC02606 Gene

Proteins for LINC02606 Gene

Post-translational modifications for LINC02606 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LINC02606 Gene

Domains & Families for LINC02606 Gene

Gene Families for LINC02606 Gene

genes like me logo Genes that share domains with LINC02606: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LINC02606 Gene

Function for LINC02606 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LINC02606 Gene

Localization for LINC02606 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LINC02606 Gene

Pathways & Interactions for LINC02606 Gene

PathCards logo

SuperPathways for LINC02606 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LINC02606 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LINC02606 Gene

Drugs & Compounds for LINC02606 Gene

No Compound Related Data Available

Transcripts for LINC02606 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for LINC02606 Gene

RNAcentral Transcript ID RNA Type Length (nts) # of Sources Source Identifiers and Annotations
URS0000BD429C_9606 lncRNA 2442 2

Ensembl: ENST00000641325 (view in UCSC) ,

LNCipedia: lnc-GPR157-7:2,

URS0000BD6447_9606 lncRNA 841 2

Ensembl: ENST00000641940 (view in UCSC) ,

LNCipedia: lnc-GPR157-7:1,

URS0000BD32A7_9606 lncRNA 484 2

Ensembl: ENST00000641507 (view in UCSC) ,

LNCipedia: lnc-GPR157-7:6,

URS00007E428E_9606 lncRNA 2363 1

RefSeq: NR_104622,

URS00007E4AEC_9606 lncRNA 2363 1

RefSeq: NR_104623,

LINC02606 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Additional transcripts not in RNAcentral for LINC02606 Gene

3 NCBI additional mRNA sequence :

Alternative Splicing Database (ASD) splice patterns (SP) for LINC02606 Gene

No ASD Table

Relevant External Links for LINC02606 Gene

GeneLoc Exon Structure for
LINC02606

Expression for LINC02606 Gene

Transcriptomic regulation report from SPP (The Signaling Pathways Project) for LINC02606

SOURCE GeneReport for Unigene cluster for LINC02606 Gene:

Hs.568596
No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LINC02606 Gene

Orthologs for LINC02606 Gene

Evolution for LINC02606 Gene

ENSEMBL:
Gene Tree for LINC02606 (if available)
TreeFam:
Gene Tree for LINC02606 (if available)
Alliance of Genome Resources:
Additional Orthologs for LINC02606

No data available for Orthologs for LINC02606 Gene

Paralogs for LINC02606 Gene

No data available for Paralogs for LINC02606 Gene

Variants for LINC02606 Gene

dbSNP identifiers (rs#s) for variants without ClinVar clinical significance for LINC02606 Gene

All consequence types are included: molecular consequences (e.g. missense, synonymous), and location-based (e.g. intron, upstream).

Structural Variations from Database of Genomic Variants (DGV) for LINC02606 Gene

Variant ID Type Subtype PubMed ID
nsv1013224 CNV gain 25217958

Additional Variant Information for LINC02606 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
LINC02606
Leiden Open Variation Database (LOVD)
LINC02606

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP and Variation tolerance for LINC02606 Gene

Disorders for LINC02606 Gene

Additional Disease Information for LINC02606

Open Targets Platform
Open Targets Platform

No disorders were found for LINC02606 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for LINC02606 Gene

Publications for LINC02606 Gene

  1. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PMID: 16344560) Kimura K … Sugano S (Genome research 2006) 3

No data available for Mastermind for LINC02606 Gene

Products for LINC02606 Gene

Sources for LINC02606 Gene