LINC02579 Gene (RNA Gene)

Long Intergenic Non-Protein Coding RNA 2579

GC02P064607
GIFtS:
9

Aliases for LINC02579 Gene

Subcategory (RNA class) for LINC02579 Gene

lncRNA

Number of RNA Genes sources:

3 / 14

Aliases for LINC02579 Gene

  • Long Intergenic Non-Protein Coding RNA 2579 2 3 5
  • LINC02579 2 168
  • HSALNG0015486 167
  • NONHSAG027969 92

External Ids for LINC02579 Gene

Summaries for LINC02579 Gene

GeneCards Summary for LINC02579 Gene

LINC02579 (Long Intergenic Non-Protein Coding RNA 2579) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for LINC02579 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LINC02579 Gene

Genomics for LINC02579 Gene

GeneHancer (GH) Regulatory Elements for LINC02579 Gene

Promoters and enhancers for LINC02579 Gene
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LINC02579 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LINC02579 Gene

Genomic Locations for LINC02579 Gene
chr2:64,606,975-64,616,556
(GRCh38/hg38)
Size:
9,582 bases
Orientation:
Plus strand

Genomic View for LINC02579 Gene

Genes around LINC02579 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LINC02579 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LINC02579 Gene
GeneLoc Logo Genomic Neighborhood • Exon Structure • Gene Density

RefSeq DNA sequence for LINC02579 Gene

Proteins for LINC02579 Gene

Products:

  1. Antibody
  2. Protein
  3. Assay

Post-translational modifications for LINC02579 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LINC02579 Gene

Domains & Families for LINC02579 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LINC02579 Gene

Function for LINC02579 Gene

Products:

  1. Animal Model
  2. CRISPR
  3. miRNA
  4. Inhibitory RNA
  5. Clone
  6. Cell Line

Phenotypes From GWAS Catalog for LINC02579 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LINC02579 Gene

Localization for LINC02579 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LINC02579 Gene

Pathways & Interactions for LINC02579 Gene

PathCards logo

SuperPathways for LINC02579 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for LINC02579 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LINC02579 Gene

Drugs & Compounds for LINC02579 Gene

Products:

  1. Drug
No Compound Related Data Available

Transcripts for LINC02579 Gene

Products:

  1. CRISPR
  2. miRNA
  3. Inhibitory RNA
  4. Clone

mRNA/cDNA for LINC02579 Gene

8 RNACentral transcripts :
1 REFSEQ mRNAs :
2 NCBI additional mRNA sequence :
2 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
3 NONCODE transcripts :
3 LncBook transcripts :
6 LNCipedia transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for LINC02579 Gene

No ASD Table

Relevant External Links for LINC02579 Gene

GeneLoc Exon Structure for
LINC02579

Expression for LINC02579 Gene

Products:

  1. Primer

Transcriptomic regulation report from SPP (The Signaling Pathways Project) for LINC02579

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LINC02579 Gene

Orthologs for LINC02579 Gene

Evolution for LINC02579 Gene

ENSEMBL:
Gene Tree for LINC02579 (if available)
TreeFam:
Gene Tree for LINC02579 (if available)

No data available for Orthologs for LINC02579 Gene

Paralogs for LINC02579 Gene

No data available for Paralogs for LINC02579 Gene

Variants for LINC02579 Gene

Additional dbSNP identifiers (rs#s) for LINC02579 Gene

Structural Variations from Database of Genomic Variants (DGV) for LINC02579 Gene

Variant ID Type Subtype PubMed ID
nsv2756 CNV deletion 18451855
nsv582127 CNV gain 21841781
nsv7313 OTHER inversion 18451855

Additional Variant Information for LINC02579 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
LINC02579

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP and Variation tolerance for LINC02579 Gene

Disorders for LINC02579 Gene

Additional Disease Information for LINC02579

ATLAS of Genetics and Cytogenetics in Oncology and Haematology

No disorders were found for LINC02579 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for LINC02579 Gene

Publications for LINC02579 Gene

  1. Epidermal long non-coding RNAs are regulated by ultraviolet irradiation. (PMID: 28942040) Kim KH … Lee TR (Gene 2017) 2 3 54
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg RL … Mammalian Gene Collection Program Team (Proceedings of the National Academy of Sciences of the United States of America 2002) 3 54

No data available for Mastermind for LINC02579 Gene

Products for LINC02579 Gene

Sources for LINC02579 Gene