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Aliases for LINC02577 Gene

Subcategory (RNA class) for LINC02577 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for LINC02577 Gene

  • Long Intergenic Non-Protein Coding RNA 2577 2 3 5

External Ids for LINC02577 Gene

Summaries for LINC02577 Gene

GeneCards Summary for LINC02577 Gene

LINC02577 (Long Intergenic Non-Protein Coding RNA 2577) is an RNA Gene, and is affiliated with the non-coding RNA class.

Additional gene information for LINC02577 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LINC02577 Gene

Genomics for LINC02577 Gene

GeneHancer (GH) Regulatory Elements for LINC02577 Gene

Promoters and enhancers for LINC02577 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH07I106772 Enhancer 1.7 FANTOM5 Ensembl ENCODE dbSUPER 564.4 -0.5 -460 4.6 HDGF PKNOX1 SMAD1 ARNT YY1 POLR2B ZNF766 E2F8 FOS ZNF592 LINC02577 ATXN7L1 CBLL1 ENSG00000272072 CCDC71L ENSG00000267052 PIK3CG COG5 ENSG00000243797
GH07I106765 Enhancer 1.4 FANTOM5 Ensembl ENCODE 13.4 -6.4 -6359 5.7 ATF1 BRCA1 ZNF766 FOS ATF7 RUNX3 CAVIN1 ZNF592 MEF2D MAFF ENSG00000243797 ENSG00000272072 LINC02577 PIK3CG CCDC71L ENSG00000267052 COG5 HBP1 NAMPT
GH07I106779 Enhancer 0.7 ENCODE 5 +5.1 5064 1 CTCF ESRRA TEAD4 MAX RAD21 RELA CTBP1 POLR2A HNF4G ZNF143 RNA5SP236 CCDC71L PIK3CG LINC02577
GH07I106777 Enhancer 0.6 dbSUPER 0.8 +3.1 3077 1.6 HDAC1 MTA2 CHAMP1 MITF CC2D1A MEF2D POLR2A IKZF1 TRIM24 PRDM10 CCDC71L PIK3CG PRKAR2B ENSG00000267052 LINC02577 RNA5SP236
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around LINC02577 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LINC02577 Gene

Genomic Locations for LINC02577 Gene
chr7:106,775,011-106,795,564
(GRCh38/hg38)
Size:
20,554 bases
Orientation:
Plus strand
chr7:106,415,457-106,436,010
(GRCh37/hg19)

Genomic View for LINC02577 Gene

Genes around LINC02577 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LINC02577 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LINC02577 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for LINC02577 Gene

Proteins for LINC02577 Gene

Post-translational modifications for LINC02577 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LINC02577 Gene

Domains & Families for LINC02577 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LINC02577 Gene

Function for LINC02577 Gene

Phenotypes From GWAS Catalog for LINC02577 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LINC02577 Gene

Localization for LINC02577 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LINC02577 Gene

Pathways & Interactions for LINC02577 Gene

SuperPathways for LINC02577 Gene

No Data Available

Interacting Proteins for LINC02577 Gene

Gene Ontology (GO) - Biological Process for LINC02577 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LINC02577 Gene

Drugs & Compounds for LINC02577 Gene

No Compound Related Data Available

Transcripts for LINC02577 Gene

mRNA/cDNA for LINC02577 Gene

(3) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for LINC02577 Gene

No ASD Table

Relevant External Links for LINC02577 Gene

GeneLoc Exon Structure for
LINC02577
ECgene alternative splicing isoforms for
LINC02577

Expression for LINC02577 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LINC02577 Gene

Orthologs for LINC02577 Gene

Evolution for LINC02577 Gene

ENSEMBL:
Gene Tree for LINC02577 (if available)
TreeFam:
Gene Tree for LINC02577 (if available)

No data available for Orthologs for LINC02577 Gene

Paralogs for LINC02577 Gene

No data available for Paralogs for LINC02577 Gene

Variants for LINC02577 Gene

Additional Variant Information for LINC02577 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
LINC02577

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for LINC02577 Gene

Disorders for LINC02577 Gene

No disorders were found for LINC02577 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LINC02577 Gene

Publications for LINC02577 Gene

  1. Epidermal long non-coding RNAs are regulated by ultraviolet irradiation. (PMID: 28942040) Kim KH … Lee TR (Gene 2017) 2 3 58
  2. Human chromosome 7: DNA sequence and biology. (PMID: 12690205) Scherer SW … Tsui LC (Science (New York, N.Y.) 2003) 3 58
  3. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg RL … Mammalian Gene Collection Program Team (Proceedings of the National Academy of Sciences of the United States of America 2002) 3 58

Products for LINC02577 Gene

Sources for LINC02577 Gene

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