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LINC02517 (Long Intergenic Non-Protein Coding RNA 2517) is an RNA Gene, and is affiliated with the lncRNA class.
GeneHancer (GH) Identifier | GH Type | GH Score |
GH Sources | Gene Association Score | Total Score | TSS distance (kb) | Number of Genes Away | Size (kb) | Transcription Factor Binding Sites |
Gene Targets |
---|---|---|---|---|---|---|---|---|---|---|
GH04J008315 | Promoter/Enhancer | 1.4 | EPDnew Ensembl ENCODE CraniofacialAtlas | 600.7 | -3.4 | -3404 | 8.2 | HNRNPL CTCF ZIC2 ZSCAN4 PATZ1 REST SP1 ZFX SCRT2 JUND | LINC02517 SH3TC1 GMPSP1 LOC112268463 HTRA3 TRMT44 | |
GH04J008321 | Enhancer | 0.9 | Ensembl ENCODE | 0.7 | +3.9 | 3938 | 4.9 | CREB1 ATF7 YBX1 MTA2 MTA1 ZNF140 RFX1 CTBP1 TSC22D4 ZBTB5 | ENPP7P10 TRMT44 GPR78 CPZ ENSG00000251615 SH3TC1 GMPSP1 HTRA3 LINC02517 HSALNG0032738 | |
GH04J008309 | Enhancer | 0.7 | Ensembl ENCODE | 0.4 | -10.3 | -10304 | 2 | ZBTB33 CEBPB FOXK2 BCOR MNT TFAP4 HLF CTCF EGR1 | LOC112268463 LINC02517 HTRA3 TRMT44 | |
GH04J008330 | Enhancer | 0.4 | Ensembl | 0.4 | +10.9 | 10895 | 2 | SP1 NR2F2 NR3C1 | ACOX3 HSALNG0032738 LINC02517 HTRA3 TRMT44 |
RNAcentral Transcript ID | Subcategory | Length (nts) | # of Sources | Source Identifiers and Annotations |
---|---|---|---|---|
URS000033C127_9606 | lncRNA | 492 | 4 |
Ensembl: ENST00000509453 (view in UCSC) , LncBook: HSALNT0068800, LNCipedia: LINC02517:10, NONCODE: NONHSAT095086.2, |
URS0000D5EFB4_9606 | lncRNA | 1364 | 2 |
Ensembl: ENST00000646635 (view in UCSC) , LNCipedia: LINC02517:2, |
URS0000BC448D_9606 | lncRNA | 788 | 2 |
HGNC: 53506, RefSeq: NR_149125, |
URS0000EF265A_9606 | lncRNA | 1644 | 1 |
Ensembl: ENST00000661956 (view in UCSC) , |
URS0000EF4CB7_9606 | lncRNA | 1003 | 1 |
Ensembl: ENST00000658537 (view in UCSC) , |
No disorders were found for LINC02517 Gene.