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Aliases for LINC02498 Gene
Subcategory (RNA class) for LINC02498 Gene
lncRNA
Number of RNA Genes sources:
3 / 17
Aliases for LINC02498 Gene
External Ids for LINC02498 Gene
- HGNC: 53483
- Entrez Gene: 102723525
- Ensembl: ENSG00000283083
Previous GeneCards Identifiers for LINC02498 Gene
- GC04P012643
- GC04P012807
- GC04P012829
- GC04P013181
- GC04P011832
- GC04P011996
- GC04P012154
- GC04P012318
- GC04P012477
Summaries for LINC02498 Gene
GeneCards Summary for LINC02498 Gene
LINC02498 (Long Intergenic Non-Protein Coding RNA 2498) is an RNA Gene, and is affiliated with the lncRNA class.
Additional gene information for LINC02498 Gene
No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LINC02498 Gene
Genomics for LINC02498 Gene
GeneHancer (GH) Regulatory Elements Pubs
Promoters and enhancers for LINC02498 Gene
| GeneHancer (GH) Identifier | GH Type | GH Score |
GH Sources | Gene Association Score | Total Score | TSS distance (kb) | Number of Genes Away | Size (kb) | Transcription Factor Binding Sites |
Gene Targets |
|---|---|---|---|---|---|---|---|---|---|---|
| GH04J010737 | Promoter | 0.6 | EPDnew | 600.7 | +0.0 | 14 | 0.1 | RFX1 BMI1 NR2F1 | LINC02498 CLNK lnc-DRD5-7 HS3ST1 | |
| GH04J010734 | Promoter | 0.7 | EPDnew | 0.7 | -2.7 | -2698 | 0.1 | TCF12 IKZF2 RFX1 IKZF1 TBX21 MTA2 BHLHE40 EGR1 RAD51 | CLNK LINC02498 HS3ST1 | |
| GH04J010742 | Enhancer | 1 | Ensembl ENCODE | 0.4 | +5.4 | 5350 | 2.2 | STAT3 RELA IKZF2 RCOR1 TRIM22 EED YBX1 ARID3A DPF2 RELB | HS3ST1 CLNK LINC02498 lnc-DRD5-7 | |
| GH04J010746 | Enhancer | 0.9 | Ensembl ENCODE | 0.4 | +9.2 | 9247 | 1.5 | STAT3 IKZF2 RCOR1 RELA DPF2 RELB RUNX3 GATAD2B BCLAF1 TCF12 | HS3ST1 LINC02498 CLNK lnc-DRD5-7 | |
| GH04J010761 | Enhancer | 0.6 | Ensembl ENCODE | 0.4 | +24.9 | 24943 | 2 | PRDM10 ZBTB44 BHLHE40 GLIS1 TRIM28 | lnc-DRD5-7 piR-39858-465 LINC02498 CLNK HS3ST1 |
- Elite GeneHancer and/or Elite GeneHancer-gene association
Download GeneHancer data from 2017 publication |
Request up-to-date GeneHancer data (full dataset)
GeneHancers around LINC02498 on the GeneHancer Hub at the UCSC Golden Path
Genomic Locations for LINC02498 Gene
Genomic Locations for LINC02498 Gene
- chr4:10,737,558-10,808,910
- (GRCh38/hg38)
- Size:
- 71,353 bases
- Orientation:
- Plus strand
Genomic View for LINC02498 Gene
Genes around LINC02498 on UCSC Golden Path with GeneCards custom track
LINC02498 in the GeneCards ncRNA compendium hub on the UCSC Golden Path
- Cytogenetic band:
-
- 4p16.1 by HGNC
- 4p16.1 by Entrez Gene
- 4p16.1 by Ensembl
LINC02498 Gene in genomic location: bands according to
Ensembl, locations according to GeneLoc
(and/or Entrez Gene and/or Ensembl if different)
Genomic Neighborhood
• Exon Structure
• Gene Density
RefSeq DNA sequence for LINC02498 Gene
Proteins for LINC02498 Gene
Post-translational modifications for LINC02498 Gene
No Post-translational modifications
Antibody Products
Protein Products
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for LINC02498
- Origene Custom Protein Services for LINC02498
No data available for DME Specific Peptides for LINC02498 Gene
Domains & Families for LINC02498 Gene
Gene Families for LINC02498 Gene
No data available for Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LINC02498 Gene
Function for LINC02498 Gene
Phenotypes From GWAS Catalog for LINC02498 Gene
Animal Model Products
- Taconic Biosciences: Generate A Custom CRISPR Mouse Model For Your Study
CRISPR Products
- Browse CRISPR knockouts for LINC02498
miRNA Products
Inhibitory RNA Products
Clone Products
No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LINC02498 Gene
Localization for LINC02498 Gene
No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LINC02498 Gene
Transcripts for LINC02498 Gene
Non-coding RNA (ncRNA) Transcripts from RNAcentral for LINC02498 Gene
| RNAcentral Transcript ID | Subcategory | Length (nts) | # of Sources | Source Identifiers and Annotations |
|---|---|---|---|---|
| URS0000EF5977_9606 | lncRNA | 1079 | 2 |
HGNC: 53483, Ensembl: ENST00000635390 (view in UCSC) , |
| URS00008B6345_9606 | lncRNA | 815 | 3 |
LncBook: HSALNT0069101, LNCipedia: LINC02498:10, NONCODE: NONHSAT095510.2, |
| URS00008B8156_9606 | lncRNA | 574 | 3 |
LncBook: HSALNT0069108, LNCipedia: LINC02498:13, NONCODE: NONHSAT095513.2, |
| URS00008B7196_9606 | lncRNA | 564 | 3 |
LncBook: HSALNT0069105, LNCipedia: LINC02498:12, NONCODE: NONHSAT095512.2, |
| URS00009B0D39_9606 | lncRNA | 1341 | 2 |
LncBook: HSALNT0069104, NONCODE: NONHSAT198275.1, |
LINC02498 in the GeneCards ncRNA compendium hub on the UCSC Golden Path
CRISPR Products
- Browse CRISPR knockouts for LINC02498
miRNA Products
Inhibitory RNA Products
Clone Products
Relevant External Links for LINC02498 Gene
- GeneLoc Exon Structure for
- LINC02498
No data available for mRNA/cDNA for LINC02498 Gene
Expression for LINC02498 Gene
No Expression Related Data Available
Primer Products
No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LINC02498 Gene
Orthologs for LINC02498 Gene
No data available for Orthologs for LINC02498 Gene
Paralogs for LINC02498 Gene
No data available for Paralogs for LINC02498 Gene
Variants for LINC02498 Gene
Additional Variant Information for LINC02498 Gene
- SNPedia medical, phenotypic, and genealogical associations of SNPs for
- LINC02498
No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for LINC02498 Gene
Disorders for LINC02498 Gene
No disorders were found for LINC02498 Gene.
No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LINC02498 Gene
Publications for LINC02498 Gene
No publications were found for LINC02498 Gene.
No data available for Mastermind for LINC02498 Gene
Products for LINC02498 Gene
- Browse OriGene Antibodies
- Custom Antibody Services
- Browse OriGene ELISA Kits
- Custom Assay Services
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for LINC02498
- Origene Custom Protein Services for LINC02498
- Browse OriGene Inhibitory RNA Products For LINC02498
- Browse OriGene qPCR primer pairs and template standards
- Browse CRISPR knockouts for LINC02498
- Custom cloning services - gene synthesis, subcloning, mutagenesis, variant library, vector shuttling
- Browse OriGene miRNA Products For LINC02498
- Browse Sino Biological cDNA Clones
- Browse Sino Biological Recombinant Proteins
- Browse Sino Biological Cell Lysates
- Browse Sino Biological Antibodies
- Browse Sino Biological Assays
- Browse ELISA Kits
- Browse CRO Services
- High-throughput Antibody Production Service
- Protein Production Service
- Epitope Tag Antibodies & Reporter Protein Antibodies
- Lentiviral ORF Clones
- Browse GeneCopoeia Cell Lines
- Search GeneCopoeia for knockout CRISPR/Cas9 clones, lentivirus, and/or AAV products for LINC02498
- Search GeneCopoeia for ORF cDNA, lentivirus, AAV viral particles, and/or promoter clone products for LINC02498
- Search GeneCopoeia for miRNA 3'UTR Target clone products for LINC02498
- Search GeneCopoeia for shRNA, lentivirus, and/or AAV clone products for LINC02498
Sources for LINC02498 Gene
- (1) GeneCards
- (2) HGNC
- (3) NCBI Entrez Gene
- (4) UniProtKB/Swiss-Prot
- (5) Ensembl
- (6) OMIM
- (7) GeneLoc
- (8) Gene Wiki
- (9) UCSC
- (10) PhosphoSitePlus
- (11) Cell Signaling Technology
- (12) GO
- (13) UniProtKB/TrEMBL
- (14) InterPro
- (15) ProtoNet
- (16) Blocks
- (17) MGI
- (18) IUBMB
- (19) KEGG
- (20) MINT
- (21) STRING
- (22) IntAct
- (23) Novoseek
- (24) PharmGKB
- (25) DrugBank
- (26) HMDB
- (27) ASD
- (28) SAGE
- (29) SOURCE
- (30) HomoloGene
- (31) PanEnsembl
- (32) euGenes
- (33) SGD
- (34) FlyBase
- (35) WormBase
- (36) Pseudogene
- (37) DGV
- (38) dbSNP
- (39) GenAtlas
- (40) HGMD
- (41) GAD
- (42) BGMUT
- (43) HuGE
- (44) Atlas
- (45) GenBank
- (46) HORDE
- (47) HUGE
- (48) IMGT
- (49) Leiden
- (50) miRBase
- (51) DME
- (52) OriGene
- (53) PubMed
- (54) R&D Systems
- (55) TGDB
- (56) Tocris
- (57) Abcam
- (58) Novus Biologicals
- (59) ProSpec
- (60) Sino Biological
- (61) GenScript
- (62) Qiagen
- (63) OCA
- (64) Proteopedia
- (65) MOPED
- (66) neXtProt
- (67) Reactome
- (68) GeneGo (Thomson Reuters)
- (69) DISEASES
- (70) SIMAP
- (71) GenomeRNAi
- (72) LifeMap
- (73) miRTarBase
- (74) MalaCards
- (75) Invitrogen
- (76) BitterDB
- (77) ESI-BIO
- (78) RefSeq
- (79) BioSystems
- (80) MaxQB
- (81) IUPHAR
- (82) BioGPS
- (83) Illumina
- (84) COMPARTMENTS
- (85) HOMER
- (86) PaxDb
- (87) ApexBio
- (88) Addgene
- (89) antibodies-online
- (90) CYP
- (91) NONCODE
- (92) TreeFam
- (93) PathCards
- (94) GeneReviews
- (95) GeneTex
- (96) Taconic Biosciences
- (97) GTEx
- (98) ProteomicsDB
- (99) SCBT
- (100) DGIdb
- (101) ClinicalTrials
- (102) RVIS
- (103) SIGNOR
- (104) diseasecard
- (105) NIH Rare Diseases
- (106) Orphanet
- (107) UMLS
- (108) GTR
- (109) Disease Ontology
- (110) Genetics Home Reference
- (111) MeSH
- (112) MedlinePlus
- (113) CDC
- (114) NINDS
- (115) NCBI Bookshelf
- (116) ClinVar
- (117) Gene Damage Index
- (118) HPO
- (119) UDN
- (120) VISTA
- (121) FANTOM5
- (122) ENCODE
- (123) ProSci
- (124) Horizon
- (125) The Signaling Pathways Project (SPP)
- (126) IID
- (127) VectorBuilder
- (128) SNPedia
- (129) BRCA Exchange
- (130) CIViC
- (131) ProteoGenix
- (132) dbSUPER
- (133) TISSUES
- (134) Gene ORGANizer
- (135) abm
- (136) Human Protein Atlas
- (137) GWAS Catalog
- (138) Monarch Initiative
- (139) DataMed
- (140) HumanCyc
- (141) UCNEbase
- (142) EPDnew
- (143) Applied Biosystems
- (144) GlyConnect
- (145) Aminode
- (146) GeneCopoeia
- (147) GPS-Prot
- (148) RNACentral
- (149) LncRNADisease
- (150) LOVD
- (151) miR2Disease
- (152) DiseaseEnhancer
- (153) Boster Bio
- (154) Biorbyt
- (155) Biocompare
- (156) Mastermind
- (157) CTD^2 Dashboard
- (158) CraniofacialAtlas
- (159) GeneImprint
- (160) Synthego
- (161) ENA
- (162) GtRNAdb
- (163) LncBase
- (164) LncBook
- (165) LNCipedia
- (166) Modomics
- (167) PDBe
- (168) Rfam
- (169) SILVA
- (170) snOPY
- (171) SRPDB
- (172) GENCODE
- (173) TarBase
- (174) Signalway Antibody
- (175) Open Targets Platform
- (176) 5SRRNADB
- (177) snoDB
- (178) MirGeneDB