Aliases for LINC02489 Gene

Subcategory (RNA class) for LINC02489 Gene

lncRNA

Number of RNA Genes sources:

3 / 17

Aliases for LINC02489 Gene

  • Long Intergenic Non-Protein Coding RNA 2489 2 3 5
  • LINC02489 2 5 165
  • NONHSAG008200.2 91
  • HSALNG0083979 164
  • CTD-2589M5 2

External Ids for LINC02489 Gene

Previous GeneCards Identifiers for LINC02489 Gene

  • GC11M055885
  • GC11M056129
  • GC11M056303
  • GC11M059868
  • GC11M052968
  • GC11M053641
  • GC11M054306
  • GC11M054972
  • GC11M055690

Summaries for LINC02489 Gene

GeneCards Summary for LINC02489 Gene

LINC02489 (Long Intergenic Non-Protein Coding RNA 2489) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for LINC02489 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LINC02489 Gene

Genomics for LINC02489 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for LINC02489 Gene
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LINC02489 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for LINC02489 Gene

Genomic Locations for LINC02489 Gene
chr11:46,254,792-46,274,869
(GRCh38/hg38)
Size:
20,078 bases
Orientation:
Minus strand

Genomic View for LINC02489 Gene

Genes around LINC02489 on UCSC Golden Path with GeneCards custom track
LINC02489 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Cytogenetic band:
LINC02489 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LINC02489 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LINC02489 Gene

Proteins for LINC02489 Gene

Post-translational modifications for LINC02489 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LINC02489 Gene

Domains & Families for LINC02489 Gene

Gene Families for LINC02489 Gene

genes like me logo Genes that share domains with LINC02489: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LINC02489 Gene

Function for LINC02489 Gene

Phenotypes From GWAS Catalog for LINC02489 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LINC02489 Gene

Localization for LINC02489 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LINC02489 Gene

Pathways & Interactions for LINC02489 Gene

PathCards logo

SuperPathways for LINC02489 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LINC02489 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LINC02489 Gene

Drugs & Compounds for LINC02489 Gene

No Compound Related Data Available

Transcripts for LINC02489 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for LINC02489 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS00001B2E4F_9606 lncRNA 354 4

HGNC: 53470,

Ensembl: ENST00000527239 (view in UCSC) ,

LNCipedia: LINC02489:5,

NONCODE: NONHSAT021164.2,

URS00008BD1CC_9606 lncRNA 272 3

LncBook: HSALNT0174951,

LNCipedia: LINC02489:6,

NONCODE: NONHSAT021163.2,

URS00009BDC21_9606 lncRNA 631 2

LncBook: HSALNT0174950,

NONCODE: NONHSAT160313.1,

URS00009B07D2_9606 lncRNA 486 2

LncBook: HSALNT0174954,

NONCODE: NONHSAT160315.1,

URS00009BD5C2_9606 lncRNA 404 2

LncBook: HSALNT0174953,

NONCODE: NONHSAT160314.1,

LINC02489 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for LINC02489 Gene

No ASD Table

Relevant External Links for LINC02489 Gene

GeneLoc Exon Structure for
LINC02489

No data available for mRNA/cDNA for LINC02489 Gene

Expression for LINC02489 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LINC02489 Gene

Orthologs for LINC02489 Gene

Evolution for LINC02489 Gene

ENSEMBL:
Gene Tree for LINC02489 (if available)
TreeFam:
Gene Tree for LINC02489 (if available)

No data available for Orthologs for LINC02489 Gene

Paralogs for LINC02489 Gene

No data available for Paralogs for LINC02489 Gene

Variants for LINC02489 Gene

Additional dbSNP identifiers (rs#s) for LINC02489 Gene

Additional Variant Information for LINC02489 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
LINC02489

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for LINC02489 Gene

Disorders for LINC02489 Gene

Additional Disease Information for LINC02489

No disorders were found for LINC02489 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for LINC02489 Gene

Publications for LINC02489 Gene

  1. Long non-coding RNA CTA sensitizes osteosarcoma cells to doxorubicin through inhibition of autophagy. (PMID: 28415557) Wang Z … Wu S (Oncotarget 2017) 2 3

Products for LINC02489 Gene

Sources for LINC02489 Gene