Aliases for LINC02482 Gene

Subcategory (RNA class) for LINC02482 Gene

lncRNA

Number of RNA Genes sources:

3 / 14

Aliases for LINC02482 Gene

  • Long Intergenic Non-Protein Coding RNA 2482 2 3 5
  • LINC02482 2 168
  • HSALNG0032642 167
  • NONHSAG037395 92

External Ids for LINC02482 Gene

Summaries for LINC02482 Gene

GeneCards Summary for LINC02482 Gene

LINC02482 (Long Intergenic Non-Protein Coding RNA 2482) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for LINC02482 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LINC02482 Gene

Genomics for LINC02482 Gene

GeneHancer (GH) Regulatory Elements for LINC02482 Gene

Promoters and enhancers for LINC02482 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH04J006672 Promoter/Enhancer 2.2 EPDnew Ensembl ENCODE CraniofacialAtlas dbSUPER 531.1 -0.7 -736 3.8 ZBTB40 CTCF SIN3A TCF12 NRF1 MYC POLR2G BCLAF1 GTF2E2 PHF8 LINC02482 LOC93622 piR-33735-065 ENSG00000170846 MRFAP1L1 BLOC1S4 KIAA0232 S100P RF00017-4259 lnc-MRFAP1-2
GH04J006639 Promoter/Enhancer 2 EPDnew Ensembl ENCODE CraniofacialAtlas 11.7 +32.7 32695 3.3 ZNF217 TCF12 NRF1 POLR2G PHF8 ZFX REST POLR2A CLOCK ZBTB11 MRFAP1 piR-41119 ENSG00000170846 LINC02482
GH04J006668 Enhancer 0.6 Ensembl ENCODE 29.6 +5.2 5242 1 FOXA1 MYC BHLHE40 MNT SMARCE1 FOS LINC02482 ENSG00000170846 MRFAP1L1 BLOC1S4 MRFAP1 piR-33735-065 lnc-MRFAP1-2
GH04J006855 Promoter/Enhancer 1.4 Ensembl ENCODE dbSUPER 12.1 -182.2 -182155 1.7 SP1 FOS ZNF10 EP300 TRIM28 RELA MEF2C TRIM22 ZNF830 ZEB1 KIAA0232 LINC02482 ENSG00000170846 MRFAP1L1 BLOC1S4 piR-50308-471 lnc-CCDC96-4
GH04J006658 Promoter/Enhancer 0.9 Ensembl ENCODE 16.7 +15.0 14964 1.2 GABPA HDAC2 YY1 IKZF1 EGR1 EZH2 SUZ12 LARP7 RBBP5 DPF2 ENSG00000284847 lnc-MRFAP1-2 LINC02482 ENSG00000170846
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LINC02482 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LINC02482 Gene

Genomic Locations for LINC02482 Gene
chr4:6,648,695-6,673,965
(GRCh38/hg38)
Size:
25,271 bases
Orientation:
Minus strand
chr4:6,672,452-6,675,557
(GRCh37/hg19)
Size:
3,106 bases
Orientation:
Minus strand

Genomic View for LINC02482 Gene

Genes around LINC02482 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LINC02482 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LINC02482 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LINC02482 Gene

Proteins for LINC02482 Gene

Post-translational modifications for LINC02482 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LINC02482 Gene

Domains & Families for LINC02482 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LINC02482 Gene

Function for LINC02482 Gene

Phenotypes From GWAS Catalog for LINC02482 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LINC02482 Gene

Localization for LINC02482 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LINC02482 Gene

Pathways & Interactions for LINC02482 Gene

PathCards logo

SuperPathways for LINC02482 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for LINC02482 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LINC02482 Gene

Drugs & Compounds for LINC02482 Gene

No Compound Related Data Available

Transcripts for LINC02482 Gene

mRNA/cDNA for LINC02482 Gene

21 RNACentral transcripts :
2 REFSEQ mRNAs :
4 NCBI additional mRNA sequence :
7 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
5 NONCODE transcripts :
5 LncBook transcripts :
14 LNCipedia transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for LINC02482 Gene

No ASD Table

Relevant External Links for LINC02482 Gene

GeneLoc Exon Structure for
LINC02482

Expression for LINC02482 Gene

Transcriptomic regulation report from SPP (The Signaling Pathways Project) for LINC02482

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LINC02482 Gene

Orthologs for LINC02482 Gene

Evolution for LINC02482 Gene

ENSEMBL:
Gene Tree for LINC02482 (if available)
TreeFam:
Gene Tree for LINC02482 (if available)

No data available for Orthologs for LINC02482 Gene

Paralogs for LINC02482 Gene

No data available for Paralogs for LINC02482 Gene

Variants for LINC02482 Gene

Additional dbSNP identifiers (rs#s) for LINC02482 Gene

Additional Variant Information for LINC02482 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
LINC02482

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for LINC02482 Gene

Disorders for LINC02482 Gene

Additional Disease Information for LINC02482

No disorders were found for LINC02482 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for LINC02482 Gene

Publications for LINC02482 Gene

No publications were found for LINC02482 Gene.

No data available for Mastermind for LINC02482 Gene

Products for LINC02482 Gene

Sources for LINC02482 Gene