Aliases for LINC02464 Gene

Data sources for LINC02464 Gene:

RNA type for LINC02464 Gene

lncRNA

Aliases for LINC02464 Gene

External Ids for LINC02464 Gene

Summaries for LINC02464 Gene

GeneCards Summary for LINC02464 Gene

LINC02464 (Long Intergenic Non-Protein Coding RNA 2464) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for LINC02464 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LINC02464 Gene

Genomics for LINC02464 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for LINC02464 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH12J077349 Enhancer 0.3 Ensembl ENCODE 5.4 -32.9 -32867 1.4 ENSG00000257835 LINC02464 piR-56341-039 HSALNG0092586-003 HSALNG0092587 ENSG00000258066 NAV3 NONHSAG011762.2
GH12J077299 Enhancer 0.8 Ensembl ENCODE 0.4 +16.9 16933 2.6 JUND CTBP1 CUX1 STAT3 ZNF217 SMARCE1 MAFK FOXA1 DPF2 RAD51 RF01045-033 piR-60885-026 LINC02464 NAV3 E2F7
GH12J077319 Enhancer 0.4 Ensembl ENCODE 0.7 -2.5 -2467 2.2 NANOG HSALNG0092586-001 HSALNG0092586-002 LINC02464 NAV3 E2F7
GH12J077313 Enhancer 0.3 Ensembl 0.7 +3.9 3933 0.2 ZNF547 MAFK LINC02464 LOC105369855 RF01045-033 NAV3 E2F7
GH12J077293 Enhancer 0.3 Ensembl 0.4 +23.1 23133 1 JUND FOS piR-60885-026 RF01045-033 LINC02464 NAV3 E2F7
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LINC02464 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for LINC02464 Gene

Latest Assembly
chr12:77,214,375-77,317,234
(GRCh38/hg38)
Size:
102,860 bases
Orientation:
Minus strand

Previous Assembly
chr12:77,613,383-77,622,473
(GRCh37/hg19 by Ensembl)
Size:
9,091 bases
Orientation:
Minus strand

Genomic View for LINC02464 Gene

Genes around LINC02464 on UCSC Golden Path with GeneCards custom track
LINC02464 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Cytogenetic band:
LINC02464 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LINC02464 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LINC02464 Gene

Proteins for LINC02464 Gene

Post-translational modifications for LINC02464 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LINC02464 Gene

Domains & Families for LINC02464 Gene

Gene Families for LINC02464 Gene

genes like me logo Genes that share domains with LINC02464: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LINC02464 Gene

Function for LINC02464 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LINC02464 Gene

Localization for LINC02464 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LINC02464 Gene

Pathways & Interactions for LINC02464 Gene

PathCards logo

SuperPathways for LINC02464 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LINC02464 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LINC02464 Gene

Drugs & Compounds for LINC02464 Gene

No Compound Related Data Available

Transcripts for LINC02464 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for LINC02464 Gene

RNAcentral Transcript ID RNA Type Length (nts) # of Sources Source Identifiers and Annotations
URS0000EECE28_9606 lncRNA 1059 1

Ensembl: ENST00000552060 (view in UCSC) ,

URS00008BCB0C_9606 lncRNA 751 3

LncBook: HSALNT0191837,

LNCipedia: lnc-E2F7-2:2,

NONCODE: NONHSAT029607.2,

URS00008BD082_9606 lncRNA 248 3

LncBook: HSALNT0191835,

LNCipedia: LINC02464:4,

NONCODE: NONHSAT029606.2,

URS00009B9D89_9606 lncRNA 657 2

LncBook: HSALNT0191838,

NONCODE: NONHSAT163758.1,

URS000007CFE7_9606 lncRNA 370 2

LNCipedia: LINC02464:5,

NONCODE: NONHSAT029605.2,

LINC02464 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for LINC02464 Gene

No ASD Table

Relevant External Links for LINC02464 Gene

GeneLoc Exon Structure for
LINC02464

No data available for mRNA/cDNA for LINC02464 Gene

Expression for LINC02464 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LINC02464 Gene

Orthologs for LINC02464 Gene

Evolution for LINC02464 Gene

ENSEMBL:
Gene Tree for LINC02464 (if available)
TreeFam:
Gene Tree for LINC02464 (if available)
Alliance of Genome Resources:
Additional Orthologs for LINC02464

No data available for Orthologs for LINC02464 Gene

Paralogs for LINC02464 Gene

No data available for Paralogs for LINC02464 Gene

Variants for LINC02464 Gene

dbSNP identifiers (rs#s) for variants without ClinVar clinical significance for LINC02464 Gene

All consequence types are included: molecular consequences (e.g. missense, synonymous), and location-based (e.g. intron, upstream).

Additional Variant Information for LINC02464 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
LINC02464
Leiden Open Variation Database (LOVD)
LINC02464

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for LINC02464 Gene

Disorders for LINC02464 Gene

No disorders were found for LINC02464 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LINC02464 Gene

Publications for LINC02464 Gene

No publications were found for LINC02464 Gene.

No data available for Mastermind for LINC02464 Gene

Products for LINC02464 Gene

Sources for LINC02464 Gene