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LINC02458 (Long Intergenic Non-Protein Coding RNA 2458) is an RNA Gene, and is affiliated with the lncRNA class.
GeneHancer (GH) Identifier | GH Type | GH Score |
GH Sources | Gene Association Score | Total Score | TSS distance (kb) | Number of Genes Away | Size (kb) | Transcription Factor Binding Sites |
Gene Targets |
---|---|---|---|---|---|---|---|---|---|---|
GH12J089019 | Promoter/Enhancer | 1.6 | EPDnew Ensembl ENCODE dbSUPER | 600.1 | +290.0 | 289993 | 0.9 | CTCF TEAD4 FOXA1 REST RAD21 TRIM22 GTF2F1 YY1 ZNF561 SCRT2 | LINC02458 GALNT4 POC1B DUSP6 LOC100287355 piR-48965-032 KITLG | |
GH12J089307 | Enhancer | 0.7 | Ensembl | 619.4 | +1.9 | 1865 | 5.4 | ZNF512 FOXA1 PRDM1 SP1 SCRT2 CEBPB ZNF10 GABPA SCRT1 GATA3 | LINC02458 RNU7-120P DUSP6 RF00066-050 KITLG | |
GH12J089318 | Enhancer | 0.5 | Ensembl CraniofacialAtlas | 10.6 | -9.7 | -9735 | 1.8 | TRIM28 SPI1 | MRPS6P4 lnc-TMTC3-11 RNU7-120P DUSP6 LINC02458 KITLG | |
GH12J089333 | Enhancer | 1.1 | FANTOM5 ENCODE dbSUPER | 4.7 | -24.2 | -24242 | 0.9 | ZNF512 IKZF1 ZNF24 NR2C1 SP1 GTF2E2 HMBOX1 NR2C2 ZBTB11 GABPA | DUSP6 RNU7-120P ATP2B1 LINC02458 AB372630-001 piR-51162 KITLG | |
GH12J089322 | Enhancer | 0.3 | Ensembl | 11.5 | -12.9 | -12935 | 0.6 | GATA3 | RNU7-120P LINC02458 AB372630-001 lnc-TMTC3-11 DUSP6 KITLG |
RNAcentral Transcript ID | Subcategory | Length (nts) | # of Sources | Source Identifiers and Annotations |
---|---|---|---|---|
URS0000141ED9_9606 | lncRNA | 2941 | 3 |
Ensembl: ENST00000500381 (view in UCSC) , LNCipedia: LINC02458:15, NONCODE: NONHSAT029800.2, |
URS0000759E53_9606 | lncRNA | 2509 | 3 |
HGNC: 53394, RefSeq: NR_038385, LNCipedia: LINC02458:12, |
URS0000E6C482_9606 | lncRNA | 4177 | 1 |
Ensembl: ENST00000549278 (view in UCSC) , |
URS0000397210_9606 | lncRNA | 599 | 3 |
LncBook: HSALNT0192609, LNCipedia: LINC02458:9, NONCODE: NONHSAT029802.2, |
URS00008B4B9D_9606 | lncRNA | 338 | 3 |
LncBook: HSALNT0192616, LNCipedia: LINC02458:10, NONCODE: NONHSAT029803.2, |
No disorders were found for LINC02458 Gene.