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LINC02458 (Long Intergenic Non-Protein Coding RNA 2458) is an RNA Gene, and is affiliated with the lncRNA class.
GeneHancer (GH) Identifier | GH Type | GH Score |
GH Sources | Gene Association Score | Total Score | TSS distance (kb) | Number of Genes Away | Size (kb) | Transcription Factor Binding Sites |
Gene Targets |
---|---|---|---|---|---|---|---|---|---|---|
GH12J089019 | Promoter/Enhancer | 1.6 | EPDnew Ensembl ENCODE dbSUPER | 250.1 | +290.4 | 290390 | 0.9 | DEK CTCF THAP11 ZNF395 REST FOXA2 TRIM22 SMC3 RAD21 CTBP1 | LINC02458 GALNT4 POC1B DUSP6 LOC100287355 piR-48965-032 KITLG | |
GH12J089318 | Enhancer | 0.5 | Ensembl CraniofacialAtlas | 10.6 | -9.3 | -9338 | 1.8 | TRIM28 SPI1 | MRPS6P4 lnc-TMTC3-11 RNU7-120P DUSP6 LINC02458 KITLG | |
GH12J089333 | Enhancer | 1.1 | FANTOM5 ENCODE dbSUPER | 4.7 | -23.8 | -23845 | 0.9 | IKZF1 IRF2 BHLHE40 ZNF395 GTF2E2 VEZF1 GABPA RXRA SPI1 TFDP1 | DUSP6 RNU7-120P ATP2B1 LINC02458 AB372630-001 HSALNG0092937 HSALNG0092938 KITLG | |
GH12J089322 | Enhancer | 0.2 | Ensembl | 11.5 | -12.5 | -12538 | 0.6 | RNU7-120P LINC02458 HSALNG0092937 lnc-TMTC3-11 DUSP6 KITLG | ||
GH12J089314 | Enhancer | 0.3 | Ensembl | 4.6 | -4.4 | -4438 | 0.4 | GABPA NR4A1 | LINC02458 MRPS6P4 DUSP6 KITLG |
RNAcentral Transcript ID | Subcategory | Length (nts) | # of Sources | Source Identifiers and Annotations |
---|---|---|---|---|
URS0000141ED9_9606 | lncRNA | 2941 | 3 |
Ensembl: ENST00000500381 (view in UCSC) , LNCipedia: LINC02458:15, NONCODE: NONHSAT029800.2, |
URS0000759E53_9606 | lncRNA | 2512 | 2 |
RefSeq: NR_038385, LNCipedia: LINC02458:12, |
URS0000E6C482_9606 | lncRNA | 4177 | 1 |
Ensembl: ENST00000549278 (view in UCSC) , |
URS0000397210_9606 | lncRNA | 603 | 3 |
LncBook: HSALNT0192609, LNCipedia: LINC02458:9, NONCODE: NONHSAT029802.2, |
URS00008B4B9D_9606 | lncRNA | 340 | 3 |
LncBook: HSALNT0192616, LNCipedia: LINC02458:10, NONCODE: NONHSAT029803.2, |
No disorders were found for LINC02458 Gene.