Aliases for LINC02452 Gene

Subcategory (RNA class) for LINC02452 Gene

lncRNA

Number of RNA Genes sources:

2 / 17

Aliases for LINC02452 Gene

  • Long Intergenic Non-Protein Coding RNA 2452 2 3 5
  • LINC02452 2 5 165
  • NONHSAG011994.2 91

External Ids for LINC02452 Gene

Summaries for LINC02452 Gene

GeneCards Summary for LINC02452 Gene

LINC02452 (Long Intergenic Non-Protein Coding RNA 2452) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for LINC02452 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LINC02452 Gene

Genomics for LINC02452 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for LINC02452 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH12J096169 Enhancer 0.4 Ensembl 600.7 +1.8 1805 1.6 SCRT2 ZNF507 EGR2 EZH2 LINC02452 METAP2 ELK3 VEZT LTA4H CFAP54 ENSG00000257878 piR-36260-025
GH12J096171 Enhancer 0.4 Ensembl 600.7 -0.1 -95 1 PKNOX1 NFIC ZFHX2 NFIB LINC02452 ELK3 CFAP54 LOC105369925 LTA4H
GH12J096173 Enhancer 0.2 Ensembl 600.7 -1.4 -1395 0.8 LINC02452 ELK3 CFAP54 LOC105369925 LTA4H
GH12J096176 Enhancer 1 FANTOM5 Ensembl ENCODE dbSUPER 0.7 -4.8 -4795 3.6 RUNX3 JUN SPI1 LTA4H ELK3 CFAP54 LINC02452 LOC105369925
GH12J096165 Enhancer 0.8 Ensembl ENCODE 0.4 +6.3 6305 4.6 HNRNPL ZIC2 ZSCAN4 ZNF24 SCRT2 ZNF266 SCRT1 ZNF707 NR2F2 SALL1 LTA4H ELK3 LINC02452 piR-36260-025
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LINC02452 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for LINC02452 Gene

Genomic Locations for LINC02452 Gene
chr12:96,160,692-96,172,206
(GRCh38/hg38)
Size:
11,515 bases
Orientation:
Minus strand

Genomic View for LINC02452 Gene

Genes around LINC02452 on UCSC Golden Path with GeneCards custom track
LINC02452 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Cytogenetic band:
LINC02452 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LINC02452 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LINC02452 Gene

Proteins for LINC02452 Gene

Post-translational modifications for LINC02452 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LINC02452 Gene

Domains & Families for LINC02452 Gene

Gene Families for LINC02452 Gene

genes like me logo Genes that share domains with LINC02452: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LINC02452 Gene

Function for LINC02452 Gene

Phenotypes From GWAS Catalog for LINC02452 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LINC02452 Gene

Localization for LINC02452 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LINC02452 Gene

Pathways & Interactions for LINC02452 Gene

PathCards logo

SuperPathways for LINC02452 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LINC02452 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LINC02452 Gene

Drugs & Compounds for LINC02452 Gene

No Compound Related Data Available

Transcripts for LINC02452 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for LINC02452 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS0000A9A192_9606 lncRNA 2982 3

HGNC: 53384,

Ensembl: ENST00000637833 (view in UCSC) ,

LNCipedia: LINC02452:4,

URS00008BD27D_9606 lncRNA 271 2

LNCipedia: LINC02452:5,

NONCODE: NONHSAT030062.2,

LINC02452 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for LINC02452 Gene

No ASD Table

Relevant External Links for LINC02452 Gene

GeneLoc Exon Structure for
LINC02452

No data available for mRNA/cDNA for LINC02452 Gene

Expression for LINC02452 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LINC02452 Gene

Orthologs for LINC02452 Gene

Evolution for LINC02452 Gene

ENSEMBL:
Gene Tree for LINC02452 (if available)
TreeFam:
Gene Tree for LINC02452 (if available)

No data available for Orthologs for LINC02452 Gene

Paralogs for LINC02452 Gene

No data available for Paralogs for LINC02452 Gene

Variants for LINC02452 Gene

Additional dbSNP identifiers (rs#s) for LINC02452 Gene

Additional Variant Information for LINC02452 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
LINC02452

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for LINC02452 Gene

Disorders for LINC02452 Gene

No disorders were found for LINC02452 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LINC02452 Gene

Publications for LINC02452 Gene

No publications were found for LINC02452 Gene.

No data available for Mastermind for LINC02452 Gene

Products for LINC02452 Gene

Sources for LINC02452 Gene