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Aliases for LINC02439 Gene

Subcategory (RNA class) for LINC02439 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for LINC02439 Gene

  • Long Intergenic Non-Protein Coding RNA 2439 2 3 5

External Ids for LINC02439 Gene

Summaries for LINC02439 Gene

GeneCards Summary for LINC02439 Gene

LINC02439 (Long Intergenic Non-Protein Coding RNA 2439) is an RNA Gene, and is affiliated with the non-coding RNA class.

Additional gene information for LINC02439 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LINC02439 Gene

Genomics for LINC02439 Gene

GeneHancer (GH) Regulatory Elements for LINC02439 Gene

Promoters and enhancers for LINC02439 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH12I118813 Enhancer 0.4 ENCODE 0.4 +19.6 19565 0.2 NCOR1 TAL1 CBFA2T3 LINC02439 RNA5SP374 LOC105370017
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around LINC02439 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LINC02439 Gene

Genomic Locations for LINC02439 Gene
chr12:118,782,956-118,833,536
(GRCh38/hg38)
Size:
50,581 bases
Orientation:
Minus strand
chr12:119,256,609-119,271,341
(GRCh37/hg19)

Genomic View for LINC02439 Gene

Genes around LINC02439 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LINC02439 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LINC02439 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LINC02439 Gene

Proteins for LINC02439 Gene

Post-translational modifications for LINC02439 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LINC02439 Gene

Domains & Families for LINC02439 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LINC02439 Gene

Function for LINC02439 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LINC02439 Gene

Localization for LINC02439 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LINC02439 Gene

Pathways & Interactions for LINC02439 Gene

SuperPathways for LINC02439 Gene

No Data Available

Interacting Proteins for LINC02439 Gene

Gene Ontology (GO) - Biological Process for LINC02439 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LINC02439 Gene

Drugs & Compounds for LINC02439 Gene

No Compound Related Data Available

Transcripts for LINC02439 Gene

mRNA/cDNA for LINC02439 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for LINC02439 Gene

No ASD Table

Relevant External Links for LINC02439 Gene

GeneLoc Exon Structure for
LINC02439
ECgene alternative splicing isoforms for
LINC02439

Expression for LINC02439 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LINC02439 Gene

Orthologs for LINC02439 Gene

Evolution for LINC02439 Gene

ENSEMBL:
Gene Tree for LINC02439 (if available)
TreeFam:
Gene Tree for LINC02439 (if available)

No data available for Orthologs for LINC02439 Gene

Paralogs for LINC02439 Gene

No data available for Paralogs for LINC02439 Gene

Variants for LINC02439 Gene

Sequence variations from dbSNP and Humsavar for LINC02439 Gene

SNP ID Clin Chr 12 pos Variation AA Info Type
rs1000468589 -- 118,821,871(-) A/G intron_variant
rs1000698582 -- 118,830,457(-) G/C intron_variant
rs1000712456 -- 118,828,663(-) G/A/T intron_variant
rs1000926960 -- 118,822,156(-) C/T intron_variant
rs1001260414 -- 118,827,104(-) C/T intron_variant

Additional Variant Information for LINC02439 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
LINC02439

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for LINC02439 Gene

Disorders for LINC02439 Gene

Additional Disease Information for LINC02439

No disorders were found for LINC02439 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for LINC02439 Gene

Publications for LINC02439 Gene

No publications were found for LINC02439 Gene.

Products for LINC02439 Gene

Sources for LINC02439 Gene

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