Free for academic non-profit institutions. Other users need a Commercial license

Aliases for LINC02384 Gene

Subcategory (RNA class) for LINC02384 Gene

non-coding RNA

Quality Score for this RNA gene is

13

Aliases for LINC02384 Gene

  • Long Intergenic Non-Protein Coding RNA 2384 2 3 5

External Ids for LINC02384 Gene

Summaries for LINC02384 Gene

GeneCards Summary for LINC02384 Gene

LINC02384 (Long Intergenic Non-Protein Coding RNA 2384) is an RNA Gene, and is affiliated with the non-coding RNA class. Diseases associated with LINC02384 include Sjogren Syndrome.

Additional gene information for LINC02384 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LINC02384 Gene

Genomics for LINC02384 Gene

GeneHancer (GH) Regulatory Elements for LINC02384 Gene

Promoters and enhancers for LINC02384 Gene
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LINC02384 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LINC02384 Gene

Genomic Locations for LINC02384 Gene
chr12:68,332,888-68,451,663
(GRCh38/hg38)
Size:
118,776 bases
Orientation:
Minus strand
chr12:68,726,553-68,797,578
(GRCh37/hg19)
Size:
71,026 bases
Orientation:
Minus strand

Genomic View for LINC02384 Gene

Genes around LINC02384 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LINC02384 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LINC02384 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LINC02384 Gene

Proteins for LINC02384 Gene

Post-translational modifications for LINC02384 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LINC02384 Gene

Domains & Families for LINC02384 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LINC02384 Gene

Function for LINC02384 Gene

Phenotypes From GWAS Catalog for LINC02384 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LINC02384 Gene

Localization for LINC02384 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LINC02384 Gene

Pathways & Interactions for LINC02384 Gene

PathCards logo

SuperPathways for LINC02384 Gene

No Data Available

Interacting Proteins for LINC02384 Gene

Gene Ontology (GO) - Biological Process for LINC02384 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LINC02384 Gene

Drugs & Compounds for LINC02384 Gene

No Compound Related Data Available

Transcripts for LINC02384 Gene

mRNA/cDNA for LINC02384 Gene

(3) Additional mRNA sequences :
(8) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
(9) RNA Central transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for LINC02384 Gene

No ASD Table

Relevant External Links for LINC02384 Gene

GeneLoc Exon Structure for
LINC02384
ECgene alternative splicing isoforms for
LINC02384

Expression for LINC02384 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LINC02384 Gene

Orthologs for LINC02384 Gene

Evolution for LINC02384 Gene

ENSEMBL:
Gene Tree for LINC02384 (if available)
TreeFam:
Gene Tree for LINC02384 (if available)

No data available for Orthologs for LINC02384 Gene

Paralogs for LINC02384 Gene

No data available for Paralogs for LINC02384 Gene

Variants for LINC02384 Gene

Sequence variations from dbSNP and Humsavar for LINC02384 Gene

SNP ID Clin Chr 12 pos Variation AA Info Type
rs1000089875 -- 68,444,200(-) C/A intron_variant
rs1000200631 -- 68,435,664(-) T/A intron_variant
rs1000303712 -- 68,442,193(-) A/G intron_variant
rs1000422991 -- 68,447,816(-) T/C intron_variant
rs1000857322 -- 68,448,041(-) T/C intron_variant

Structural Variations from Database of Genomic Variants (DGV) for LINC02384 Gene

Variant ID Type Subtype PubMed ID
nsv758 CNV insertion 18451855
nsv952199 CNV duplication 24416366

Additional Variant Information for LINC02384 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
LINC02384

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for LINC02384 Gene

Disorders for LINC02384 Gene

MalaCards: The human disease database

(1) MalaCards diseases for LINC02384 Gene - From: LncRNADisease

Disorder Aliases PubMed IDs
sjogren syndrome
  • sicca syndrome
- elite association - COSMIC cancer census association via MalaCards

Additional Disease Information for LINC02384

genes like me logo Genes that share disorders with LINC02384: view

No data available for UniProtKB/Swiss-Prot and Genatlas for LINC02384 Gene

Publications for LINC02384 Gene

  1. Genome-wide association study of temperament in bipolar disorder reveals significant associations with three novel Loci. (PMID: 22365631) Greenwood TA … Kelsoe JR (Biological psychiatry 2012) 3 58
  2. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PMID: 16344560) Kimura K … Sugano S (Genome research 2006) 3 58

Products for LINC02384 Gene

Sources for LINC02384 Gene

Content
Loading form....