Aliases for LINC02373 Gene

Subcategory (RNA class) for LINC02373 Gene

lncRNA

Quality Score for this RNA gene is

14

Aliases for LINC02373 Gene

  • Long Intergenic Non-Protein Coding RNA 2373 2 3 5
  • LINC02373 2 170
  • NONHSAG011642 94
  • HSALNG0092259 169

External Ids for LINC02373 Gene

Summaries for LINC02373 Gene

GeneCards Summary for LINC02373 Gene

LINC02373 (Long Intergenic Non-Protein Coding RNA 2373) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for LINC02373 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LINC02373 Gene

Genomics for LINC02373 Gene

GeneHancer (GH) Regulatory Elements for LINC02373 Gene

Promoters and enhancers for LINC02373 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH12J069430 Enhancer 0.5 Ensembl 750.6 -0.1 -50 1.4 SP1 MGA YY1 HNF4A FEZF1 LINC02373 YEATS4 lnc-YEATS4-4
GH12J069427 Enhancer 0.5 Ensembl ENCODE 0.6 -2.6 -2632 2.5 PRDM1 CEBPB FRS2 LYZ YEATS4 LINC02373 lnc-YEATS4-4
GH12J069439 Enhancer 0.7 ENCODE 0.4 +8.9 8922 1.4 ZNF217 NCOA3 CREB1 CTBP1 ZKSCAN1 ESRRA ZNF592 CHD1 DPF2 HCFC1 FRS2 LINC02373 lnc-LRRC10-5
GH12J069438 Enhancer 0.6 ENCODE 0.4 +7.2 7159 0.8 TEAD4 CBFA2T2 SMARCA4 HDAC1 EP300 SOX6 CTBP1 NCOR1 SKIL DPF2 FRS2 NUP107 LINC02373 lnc-LRRC10-5
GH12J069442 Enhancer 0.4 Ensembl ENCODE 0.4 +11.6 11597 1 JUN FRS2 LINC02373 lnc-LRRC10-5
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LINC02373 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LINC02373 Gene

Genomic Locations for LINC02373 Gene
chr12:69,431,551-69,461,010
(GRCh38/hg38)
Size:
29,460 bases
Orientation:
Plus strand
chr12:69,843,250-69,854,504
(GRCh37/hg19)
Size:
11,255 bases
Orientation:
Plus strand

Genomic View for LINC02373 Gene

Genes around LINC02373 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LINC02373 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LINC02373 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LINC02373 Gene

Proteins for LINC02373 Gene

Post-translational modifications for LINC02373 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LINC02373 Gene

Domains & Families for LINC02373 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LINC02373 Gene

Function for LINC02373 Gene

Phenotypes From GWAS Catalog for LINC02373 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LINC02373 Gene

Localization for LINC02373 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LINC02373 Gene

Pathways & Interactions for LINC02373 Gene

PathCards logo

SuperPathways for LINC02373 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LINC02373 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LINC02373 Gene

Drugs & Compounds for LINC02373 Gene

No Compound Related Data Available

Transcripts for LINC02373 Gene

mRNA/cDNA for LINC02373 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
(3) RNACentral transcripts :
(2) LNCipedia transcripts :
(2) NONCODE transcripts :
(1) LncBook transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for LINC02373 Gene

No ASD Table

Relevant External Links for LINC02373 Gene

GeneLoc Exon Structure for
LINC02373
ECgene alternative splicing isoforms for
LINC02373

Expression for LINC02373 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LINC02373 Gene

Orthologs for LINC02373 Gene

Evolution for LINC02373 Gene

ENSEMBL:
Gene Tree for LINC02373 (if available)
TreeFam:
Gene Tree for LINC02373 (if available)

No data available for Orthologs for LINC02373 Gene

Paralogs for LINC02373 Gene

No data available for Paralogs for LINC02373 Gene

Variants for LINC02373 Gene

Sequence variations from dbSNP and Humsavar for LINC02373 Gene

SNP ID Clin Chr 12 pos Variation AA Info Type
rs1000130948 -- 69,448,817(+) C/A upstream_transcript_variant
rs1000162050 -- 69,448,499(+) G/A upstream_transcript_variant
rs1000211282 -- 69,453,891(+) C/A/G intron_variant
rs1000226263 -- 69,449,307(+) T/G upstream_transcript_variant
rs1000282497 -- 69,461,142(+) G/A intron_variant

Additional Variant Information for LINC02373 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
LINC02373

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for LINC02373 Gene

Disorders for LINC02373 Gene

No disorders were found for LINC02373 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LINC02373 Gene

Publications for LINC02373 Gene

No publications were found for LINC02373 Gene.

No data available for External Links for LINC02373 Gene

Products for LINC02373 Gene

Sources for LINC02373 Gene