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Aliases for LINC02366 Gene

Subcategory (RNA class) for LINC02366 Gene

non-coding RNA

Quality Score for this RNA gene is

13

Aliases for LINC02366 Gene

  • Long Intergenic Non-Protein Coding RNA 2366 2 3 5

External Ids for LINC02366 Gene

Summaries for LINC02366 Gene

GeneCards Summary for LINC02366 Gene

LINC02366 (Long Intergenic Non-Protein Coding RNA 2366) is an RNA Gene, and is affiliated with the non-coding RNA class.

Additional gene information for LINC02366 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LINC02366 Gene

Genomics for LINC02366 Gene

GeneHancer (GH) Regulatory Elements for LINC02366 Gene

Promoters and enhancers for LINC02366 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH12J010749 Promoter/Enhancer 1.5 Ensembl ENCODE 600.7 -0.3 -264 1.7 CTCF ELF3 ZSCAN21 SP7 RELA SP1 PRDM1 MZF1 RAD21 KAT8 LINC02366 KLRA1P TAS2R43 ENSG00000256981 TAS2R50 LINC01252 TAS2R14 YBX3
GH12J010740 Enhancer 0.9 Ensembl ENCODE 0.4 -8.8 -8833 3.6 GTF2F1 BACH1 RELA ZNF384 EGR1 ZNF316 CTBP1 NFE2 ZNF766 FOXK2 MAGOHB YBX3 KLRC1 TAS2R14 LINC02366
GH12J010752 Enhancer 0.5 Ensembl 0.7 +2.9 2909 0.7 MAFK ZFHX2 GATA3 MAFF EGR2 LINC02366 HSPE1P12
GH12J010764 Enhancer 0.3 Ensembl 0.4 +16.7 16667 5.4 PKNOX1 YBX3 KLRC1 HSPE1P12 LINC02366
GH12J010725 Enhancer 0.3 Ensembl 0.3 -24.2 -24233 1.6 MAFK ENSG00000255958 GABARAPL1 YBX3 LINC02366 GC12P010619
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LINC02366 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LINC02366 Gene

Genomic Locations for LINC02366 Gene
chr12:10,750,234-10,777,451
(GRCh38/hg38)
Size:
27,218 bases
Orientation:
Plus strand
chr12:10,902,833-10,930,043
(GRCh37/hg19)
Size:
27,211 bases
Orientation:
Plus strand

Genomic View for LINC02366 Gene

Genes around LINC02366 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LINC02366 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LINC02366 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LINC02366 Gene

Proteins for LINC02366 Gene

Post-translational modifications for LINC02366 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LINC02366 Gene

Domains & Families for LINC02366 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LINC02366 Gene

Function for LINC02366 Gene

Phenotypes From GWAS Catalog for LINC02366 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LINC02366 Gene

Localization for LINC02366 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LINC02366 Gene

Pathways & Interactions for LINC02366 Gene

PathCards logo

SuperPathways for LINC02366 Gene

No Data Available

Interacting Proteins for LINC02366 Gene

Gene Ontology (GO) - Biological Process for LINC02366 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LINC02366 Gene

Drugs & Compounds for LINC02366 Gene

No Compound Related Data Available

Transcripts for LINC02366 Gene

mRNA/cDNA for LINC02366 Gene

(3) Additional mRNA sequences :
(3) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
(4) RNA Central transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for LINC02366 Gene

No ASD Table

Relevant External Links for LINC02366 Gene

GeneLoc Exon Structure for
LINC02366
ECgene alternative splicing isoforms for
LINC02366

Expression for LINC02366 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LINC02366 Gene

Orthologs for LINC02366 Gene

Evolution for LINC02366 Gene

ENSEMBL:
Gene Tree for LINC02366 (if available)
TreeFam:
Gene Tree for LINC02366 (if available)

No data available for Orthologs for LINC02366 Gene

Paralogs for LINC02366 Gene

No data available for Paralogs for LINC02366 Gene

Variants for LINC02366 Gene

Sequence variations from dbSNP and Humsavar for LINC02366 Gene

SNP ID Clin Chr 12 pos Variation AA Info Type
rs1000004936 -- 10,764,445(+) T/A intron_variant
rs1000051660 -- 10,770,893(+) C/T intron_variant
rs1000169231 -- 10,754,872(+) C/T intron_variant
rs1000263546 -- 10,755,087(+) C/A intron_variant
rs1000354667 -- 10,764,688(+) G/A intron_variant

Structural Variations from Database of Genomic Variants (DGV) for LINC02366 Gene

Variant ID Type Subtype PubMed ID
esv3628543 CNV gain 21293372
esv3628544 CNV gain 21293372
nsv1044642 CNV gain 25217958
nsv976574 CNV duplication 23825009

Additional Variant Information for LINC02366 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
LINC02366

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for LINC02366 Gene

Disorders for LINC02366 Gene

Additional Disease Information for LINC02366

No disorders were found for LINC02366 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for LINC02366 Gene

Publications for LINC02366 Gene

  1. Creation of genome-wide protein expression libraries using random activation of gene expression. (PMID: 11329013) Harrington JJ … Ducar M (Nature biotechnology 2001) 3 58

No data available for External Links for LINC02366 Gene

Products for LINC02366 Gene

Sources for LINC02366 Gene

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