Aliases for LINC02360 Gene

Data sources for LINC02360 Gene:

Subcategory (RNA class) for LINC02360 Gene

lncRNA

Aliases for LINC02360 Gene

External Ids for LINC02360 Gene

Summaries for LINC02360 Gene

GeneCards Summary for LINC02360 Gene

LINC02360 (Long Intergenic Non-Protein Coding RNA 2360) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for LINC02360 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LINC02360 Gene

Genomics for LINC02360 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for LINC02360 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH04J012566 Enhancer 0.2 Ensembl 5.3 -796.4 -796449 0.2 LINC02360 lnc-RAB28-3 HSALNG0032951 LOC105374490 lnc-CPEB2-16 LOC105374492 lnc-RAB28-4 RAB28
GH04J011865 Enhancer 0.2 Ensembl 5 -96.9 -96949 1.6 LINC02360 HSALNG0032938 lnc-DRD5-27 HSALNG0032934 ENSG00000249631 HS3ST1
GH04J011747 Enhancer 0.6 Ensembl ENCODE 0.3 +21.8 21751 2.6 JUND MAFK BHLHE40 CREB1 FOS ENSG00000249631 LINC02360 lnc-DRD5-25 LOC107986178 HS3ST1
GH04J011740 Enhancer 0.6 Ensembl ENCODE 0.3 +28.9 28851 2.8 RFX5 STAT3 FOSL1 JUND MAFK FOS ENSG00000249631 LINC02360 lnc-DRD5-25 LOC107986178 HS3ST1
GH04J011774 Enhancer 0.3 Ensembl 0.7 -4.9 -4949 1.2 MAFK LOC105374483 LINC02360 LOC107986178 ENSG00000249631 HS3ST1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LINC02360 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for LINC02360 Gene

Latest Assembly
chr4:11,727,729-11,769,652
(GRCh38/hg38)
Size:
41,924 bases
Orientation:
Minus strand

Previous Assembly
chr4:11,742,575-11,771,092
(GRCh37/hg19 by Entrez Gene)
Size:
28,518 bases
Orientation:
Minus strand

chr4:11,742,572-11,771,092
(GRCh37/hg19 by Ensembl)
Size:
28,521 bases
Orientation:
Minus strand

Genomic View for LINC02360 Gene

Genes around LINC02360 on UCSC Golden Path with GeneCards custom track
LINC02360 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Cytogenetic band:
LINC02360 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LINC02360 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LINC02360 Gene

Proteins for LINC02360 Gene

Post-translational modifications for LINC02360 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LINC02360 Gene

Domains & Families for LINC02360 Gene

Gene Families for LINC02360 Gene

genes like me logo Genes that share domains with LINC02360: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LINC02360 Gene

Function for LINC02360 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LINC02360 Gene

Localization for LINC02360 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LINC02360 Gene

Pathways & Interactions for LINC02360 Gene

PathCards logo

SuperPathways for LINC02360 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LINC02360 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LINC02360 Gene

Drugs & Compounds for LINC02360 Gene

No Compound Related Data Available

Transcripts for LINC02360 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for LINC02360 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS000050E4D4_9606 lncRNA 657 3

Ensembl: ENST00000506195 (view in UCSC) ,

LNCipedia: LINC02360:6,

NONCODE: NONHSAT095548.2,

URS0000BC443A_9606 lncRNA 654 1

RefSeq: NR_146995,

URS00008BF7AA_9606 lncRNA 1255 3

LncBook: HSALNT0069250,

LNCipedia: LINC02360:5,

NONCODE: NONHSAT095547.2,

URS00008B4C1A_9606 lncRNA 438 3

LncBook: HSALNT0069252,

LNCipedia: LINC02360:7,

NONCODE: NONHSAT095549.2,

URS00009B9D3D_9606 lncRNA 657 2

LncBook: HSALNT0069251,

NONCODE: NONHSAT199732.1,

LINC02360 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Additional transcripts not in RNAcentral for LINC02360 Gene

1 NCBI additional mRNA sequence :

Alternative Splicing Database (ASD) splice patterns (SP) for LINC02360 Gene

No ASD Table

Relevant External Links for LINC02360 Gene

GeneLoc Exon Structure for
LINC02360

Expression for LINC02360 Gene

Transcriptomic regulation report from SPP (The Signaling Pathways Project) for LINC02360

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LINC02360 Gene

Orthologs for LINC02360 Gene

Evolution for LINC02360 Gene

ENSEMBL:
Gene Tree for LINC02360 (if available)
TreeFam:
Gene Tree for LINC02360 (if available)

No data available for Orthologs for LINC02360 Gene

Paralogs for LINC02360 Gene

No data available for Paralogs for LINC02360 Gene

Variants for LINC02360 Gene

dbSNP identifiers (rs#s) for variants without ClinVar clinical significance for LINC02360 Gene

All consequence types are included: molecular consequences (e.g. missense, synonymous), and location-based (e.g. intron, upstream).

Additional Variant Information for LINC02360 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
LINC02360

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for LINC02360 Gene

Disorders for LINC02360 Gene

Additional Disease Information for LINC02360

No disorders were found for LINC02360 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for LINC02360 Gene

Publications for LINC02360 Gene

No publications were found for LINC02360 Gene.

No data available for Mastermind for LINC02360 Gene

Products for LINC02360 Gene

Sources for LINC02360 Gene