Aliases for LINC02356 Gene

Subcategory (RNA class) for LINC02356 Gene

lncRNA

Number of RNA Genes sources:

3 / 17

Aliases for LINC02356 Gene

  • Long Intergenic Non-Protein Coding RNA 2356 2 3 5
  • LINC02356 2 5 165
  • NONHSAG012302.2 91
  • HSALNG0094035 164

External Ids for LINC02356 Gene

Summaries for LINC02356 Gene

GeneCards Summary for LINC02356 Gene

LINC02356 (Long Intergenic Non-Protein Coding RNA 2356) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for LINC02356 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LINC02356 Gene

Genomics for LINC02356 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for LINC02356 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH12J111367 Promoter/Enhancer 2 EPDnew Ensembl ENCODE CraniofacialAtlas 600.7 -0.5 -545 3.4 SP1 HNRNPL GATAD2A PRDM10 TFE3 SOX13 IKZF1 KDM1A ZNF692 RCOR2 PHETA1 LINC02356 ADAM1A PCNPP1 ANAPC7 ATXN2 TMEM116 lnc-CUX2-1 RF00017-1272 CUX2
GH12J111160 Enhancer 0.5 Ensembl 4.3 -208.4 -208437 1.2 ZIC2 ZNF600 ZNF341 ATF2 POLR2A FEZF1 GLIS1 SMARCA4 ZBTB8A MYL2 LINC02356 piR-42491-051 piR-32325-045 CUX2 PHETA1
GH12J111178 Enhancer 0.4 ENCODE 3.9 -190.9 -190889 0.2 HNF4A MEIS2 GATA2 RXRA MYL2 LINC02356 HSALNG0094030 piR-42491-051 CUX2 PHETA1
GH12J111402 Promoter/Enhancer 2.7 EPDnew FANTOM5 Ensembl ENCODE CraniofacialAtlas dbSUPER 0.3 +39.7 39704 13.1 ARHGAP35 SP1 GATAD2A CTCF ZBTB33 HNRNPL TEAD4 PRDM10 ZNF629 TFE3 SH2B3 ATXN2 ADAM1A HECTD4 ARPC3 HSPA8P14 RPS2P41 ALDH2 TMEM116 PHETA1
GH12J111396 Promoter/Enhancer 1.9 FANTOM5 Ensembl ENCODE CraniofacialAtlas dbSUPER 0.3 +29.2 29182 3.9 SP1 HNRNPL GATAD2A CTCF ZNF629 LEF1 IKZF1 KDM1A ZNF692 RCOR2 ALDH2 SH2B3 ADAM1A piR-50443-092 HSPA8P14 PHETA1 LINC02356 RF00017-1272
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LINC02356 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for LINC02356 Gene

Genomic Locations for LINC02356 Gene
chr12:111,369,261-111,403,313
(GRCh38/hg38)
Size:
34,053 bases
Orientation:
Plus strand
chr12:111,807,086-111,841,114
(GRCh37/hg19)
Size:
34,029 bases
Orientation:
Plus strand

Genomic View for LINC02356 Gene

Genes around LINC02356 on UCSC Golden Path with GeneCards custom track
LINC02356 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Cytogenetic band:
LINC02356 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LINC02356 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LINC02356 Gene

Proteins for LINC02356 Gene

Post-translational modifications for LINC02356 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LINC02356 Gene

Domains & Families for LINC02356 Gene

Gene Families for LINC02356 Gene

genes like me logo Genes that share domains with LINC02356: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LINC02356 Gene

Function for LINC02356 Gene

Phenotypes From GWAS Catalog for LINC02356 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LINC02356 Gene

Localization for LINC02356 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LINC02356 Gene

Pathways & Interactions for LINC02356 Gene

PathCards logo

SuperPathways for LINC02356 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LINC02356 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LINC02356 Gene

Drugs & Compounds for LINC02356 Gene

No Compound Related Data Available

Transcripts for LINC02356 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for LINC02356 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS000041B4A4_9606 lncRNA 209 4

Ensembl: ENST00000548846 (view in UCSC) ,

LncBook: HSALNT0194928,

LNCipedia: LINC02356:12,

NONCODE: NONHSAT030728.2,

URS0000EF63FF_9606 lncRNA 335 2

HGNC: 53278,

Ensembl: ENST00000552663 (view in UCSC) ,

URS00008B3598_9606 lncRNA 363 3

LncBook: HSALNT0194926,

LNCipedia: LINC02356:10,

NONCODE: NONHSAT030726.2,

URS0000D5B063_9606 lncRNA 332 2

LncBook: HSALNT0194925,

LNCipedia: LINC02356:9,

URS0000187390_9606 lncRNA 314 2

LNCipedia: LINC02356:11,

NONCODE: NONHSAT030727.2,

LINC02356 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for LINC02356 Gene

No ASD Table

Relevant External Links for LINC02356 Gene

GeneLoc Exon Structure for
LINC02356

No data available for mRNA/cDNA for LINC02356 Gene

Expression for LINC02356 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LINC02356 Gene

Orthologs for LINC02356 Gene

Evolution for LINC02356 Gene

ENSEMBL:
Gene Tree for LINC02356 (if available)
TreeFam:
Gene Tree for LINC02356 (if available)

No data available for Orthologs for LINC02356 Gene

Paralogs for LINC02356 Gene

No data available for Paralogs for LINC02356 Gene

Variants for LINC02356 Gene

Additional dbSNP identifiers (rs#s) for LINC02356 Gene

Additional Variant Information for LINC02356 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
LINC02356

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for LINC02356 Gene

Disorders for LINC02356 Gene

No disorders were found for LINC02356 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LINC02356 Gene

Publications for LINC02356 Gene

No publications were found for LINC02356 Gene.

No data available for Mastermind for LINC02356 Gene

Products for LINC02356 Gene

Sources for LINC02356 Gene