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Aliases for LINC02352 Gene
Subcategory (RNA class) for LINC02352 Gene
lncRNA
Quality Score for this RNA gene is
15
Aliases for LINC02352 Gene
External Ids for LINC02352 Gene
- HGNC: 53274
- Entrez Gene: 102725022
- Ensembl: ENSG00000259448
Summaries for LINC02352 Gene
GeneCards Summary for LINC02352 Gene
LINC02352 (Long Intergenic Non-Protein Coding RNA 2352) is an RNA Gene, and is affiliated with the lncRNA class.
Additional gene information for LINC02352 Gene
No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LINC02352 Gene
Genomics for LINC02352 Gene
GeneHancer (GH) Regulatory Elements for LINC02352 Gene
Promoters and enhancers for LINC02352 Gene
| GeneHancer (GH) Identifier | GH Type | GH Score |
GH Sources | Gene Association Score | Total Score | TSS distance (kb) | Number of Genes Away | Size (kb) | Transcription Factor Binding Sites |
Gene Targets |
|---|---|---|---|---|---|---|---|---|---|---|
| GH15J031214 | Promoter/Enhancer | 1.8 | Ensembl ENCODE CraniofacialAtlas dbSUPER | 757.6 | +1.6 | 1592 | 3.4 | ZNF785 SIN3A CTCF RBPJ POLR2A NR2F6 MYC HLF L3MBTL2 MAX | LINC02352 ENSG00000270055 ENSG00000247728 CHRNA7 ENSG00000215302 piR-39050 | |
| GH15J031212 | Enhancer | 0.4 | dbSUPER | 750.6 | -1.3 | -1320 | 1.4 | HLF PRDM1 ZNF512 GATA3 | LINC02352 ENSG00000270055 KLF13 ENSG00000260382 HSALNG0104809 | |
| GH15J031022 | Enhancer | 1.1 | Ensembl ENCODE CraniofacialAtlas | 5 | -188.5 | -188521 | 6.2 | ZBTB40 HLF L3MBTL2 SP1 ELF3 RNF2 PKNOX1 ZNF24 NR2C1 SOX13 | LOC105370752 MTMR10 ENSG00000215302 LINC02352 ENSG00000261628 ENSG00000259720 TRPM1 | |
| GH15J031248 | Enhancer | 0.3 | Ensembl dbSUPER | 5.3 | +34.6 | 34579 | 1.6 | MTMR10 CHRNA7 LINC02352 HSALNG0104813 lnc-OTUD7A-3 | ||
| GH15J031245 | Enhancer | 0.2 | dbSUPER | 5.1 | +32.4 | 32361 | 1.4 | CHRNA7 LINC02352 HSALNG0104813 lnc-OTUD7A-3 |
- Elite GeneHancer and/or Elite GeneHancer-gene association
Download GeneHancer data from 2017 publication |
Request up-to-date GeneHancer data (full dataset)
GeneHancers around LINC02352 on UCSC Golden Path with GeneCards custom track
Genomic Locations for LINC02352 Gene
Genomic Locations for LINC02352 Gene
- chr15:31,214,222-31,225,007
- (GRCh38/hg38)
- Size:
- 10,786 bases
- Orientation:
- Plus strand
Genomic View for LINC02352 Gene
Genes around LINC02352 on UCSC Golden Path with GeneCards custom track
- Cytogenetic band:
-
- 15q13.3 by HGNC
- 15q13.3 by Entrez Gene
- 15q13.3 by Ensembl
LINC02352 Gene in genomic location: bands according to
Ensembl, locations according to GeneLoc
(and/or Entrez Gene and/or Ensembl if different)
Genomic Neighborhood
• Exon Structure
• Gene Density
RefSeq DNA sequence for LINC02352 Gene
Proteins for LINC02352 Gene
Post-translational modifications for LINC02352 Gene
No Post-translational modifications
Antibody Products
Protein Products
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for LINC02352
- Origene Custom Protein Services for LINC02352
No data available for DME Specific Peptides for LINC02352 Gene
Domains & Families for LINC02352 Gene
No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LINC02352 Gene
Function for LINC02352 Gene
Phenotypes From GWAS Catalog for LINC02352 Gene
Animal Model Products
- Taconic Biosciences: Generate A Custom CRISPR Mouse Model For Your Study
miRNA Products
Inhibitory RNA Products
Clone Products
No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LINC02352 Gene
Localization for LINC02352 Gene
No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LINC02352 Gene
Transcripts for LINC02352 Gene
mRNA/cDNA for LINC02352 Gene
- (1) REFSEQ mRNAs :
- (1) Additional mRNA sequences :
- (3) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
-
- ENST00000559292 1450 bps (ENST00000559292.2)
- ENST00000557928 468 bps (ENST00000557928.1)
- ENST00000654993 2073 bps
- (8) RNACentral transcripts :
- (8) LNCipedia transcripts :
- (3) LncBook transcripts :
- (4) NONCODE transcripts :
CRISPR Products
- Browse CRISPR knockouts for LINC02352
miRNA Products
Inhibitory RNA Products
Clone Products
Expression for LINC02352 Gene
No Expression Related Data Available
Primer Products
No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LINC02352 Gene
Orthologs for LINC02352 Gene
No data available for Orthologs for LINC02352 Gene
Paralogs for LINC02352 Gene
No data available for Paralogs for LINC02352 Gene
Variants for LINC02352 Gene
| SNP ID | Clin | Chr 15 pos | Variation | AA Info | Type |
|---|---|---|---|---|---|
| rs1000001187 | -- | 31,215,008(+) | T/A/C | upstream_transcript_variant | |
| rs1000046762 | -- | 31,216,044(+) | G/T | intron_variant | |
| rs1000098557 | -- | 31,215,879(+) | C/A | upstream_transcript_variant | |
| rs1000237132 | -- | 31,223,604(+) | G/A | intron_variant | |
| rs1000543299 | -- | 31,220,377(+) | A/T | intron_variant |
Additional Variant Information for LINC02352 Gene
- SNPedia medical, phenotypic, and genealogical associations of SNPs for
- LINC02352
No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for LINC02352 Gene
Disorders for LINC02352 Gene
Additional Disease Information for LINC02352
No disorders were found for LINC02352 Gene.
No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for LINC02352 Gene
Publications for LINC02352 Gene
No publications were found for LINC02352 Gene.
Products for LINC02352 Gene
- Browse OriGene Antibodies
- Custom Antibody Services
- Browse OriGene ELISA Kits
- Custom Assay Services
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for LINC02352
- Origene Custom Protein Services for LINC02352
- Browse OriGene Inhibitory RNA Products For LINC02352
- Browse OriGene qPCR primer pairs and template standards
- Browse CRISPR knockouts for LINC02352
- Custom cloning services - gene synthesis, subcloning, mutagenesis, variant library, vector shuttling
- Browse OriGene miRNA Products For LINC02352
- Browse Sino Biological cDNA Clones
- Browse Sino Biological Recombinant Proteins
- Browse Sino Biological Cell Lysates
- Browse Sino Biological Antibodies
- Browse Sino Biological Assays
- Browse ELISA Kits
- Browse CRO Services
- High-throughput Antibody Production Service
- Protein Production Service
- Epitope Tag Antibodies & Reporter Protein Antibodies
- Lentiviral ORF Clones
- Browse GeneCopoeia Cell Lines
- Search GeneCopoeia for knockout CRISPR/Cas9 clones, lentivirus, and/or AAV products for LINC02352
- Search GeneCopoeia for ORF cDNA, lentivirus, AAV viral particles, and/or promoter clone products for LINC02352
- Search GeneCopoeia for miRNA 3'UTR Target clone products for LINC02352
- Search GeneCopoeia for shRNA, lentivirus, and/or AAV clone products for LINC02352
Sources for LINC02352 Gene
- (1) GeneCards
- (2) HGNC
- (3) NCBI Entrez Gene
- (4) UniProtKB/Swiss-Prot
- (5) Ensembl
- (6) OMIM
- (7) GeneLoc
- (8) Gene Wiki
- (9) UCSC
- (10) PhosphoSitePlus
- (11) Cell Signaling Technology
- (12) GO
- (13) UniProtKB/TrEMBL
- (14) InterPro
- (15) ProtoNet
- (16) Blocks
- (17) MGI
- (18) IUBMB
- (19) KEGG
- (20) MINT
- (21) STRING
- (22) IntAct
- (23) Novoseek
- (24) PharmGKB
- (25) DrugBank
- (26) HMDB
- (27) AceView
- (28) ASD
- (29) ECgene
- (30) CGAP SAGE
- (31) SOURCE
- (32) HomoloGene
- (33) PanEnsembl
- (34) euGenes
- (35) SGD
- (36) FlyBase
- (37) WormBase
- (38) Pseudogene
- (39) DGV
- (40) dbSNP
- (41) GenAtlas
- (42) HGMD
- (43) GAD
- (44) BGMUT
- (45) HuGE
- (46) Atlas
- (47) GenBank
- (48) H-invDB
- (49) HORDE
- (50) HUGE
- (51) IMGT
- (52) Leiden
- (53) miRBase
- (54) DME
- (55) OriGene
- (56) PubMed
- (57) R&D Systems
- (58) TGDB
- (59) Tocris
- (60) Abcam
- (61) Novus Biologicals
- (62) ProSpec
- (63) Sino Biological
- (64) GenScript
- (65) Qiagen
- (66) OCA
- (67) Proteopedia
- (68) MOPED
- (69) neXtProt
- (70) Reactome
- (71) GeneGo (Thomson Reuters)
- (72) DISEASES
- (73) SIMAP
- (74) GenomeRNAi
- (75) LifeMap
- (76) miRTarBase
- (77) MalaCards
- (78) Invitrogen
- (79) BitterDB
- (80) ESI-BIO
- (81) RefSeq
- (82) BioSystems
- (83) MaxQB
- (84) IUPHAR
- (85) BioGPS
- (86) Illumina
- (87) COMPARTMENTS
- (88) HOMER
- (89) PaxDb
- (90) ApexBio
- (91) Addgene
- (92) antibodies-online
- (93) CYP
- (94) NONCODE
- (95) TreeFam
- (96) PathCards
- (97) GeneReviews
- (98) GeneTex
- (99) Taconic Biosciences
- (100) GTEx
- (101) ProteomicsDB
- (102) SCBT
- (103) DGIdb
- (104) ClinicalTrials
- (105) RVIS
- (106) SIGNOR
- (107) diseasecard
- (108) NIH Rare Diseases
- (109) Orphanet
- (110) UMLS
- (111) GTR
- (112) Disease Ontology
- (113) Genetics Home Reference
- (114) MeSH
- (115) MedlinePlus
- (116) CDC
- (117) NINDS
- (118) NCBI Bookshelf
- (119) ClinVar
- (120) Gene Damage Index
- (121) HPO
- (122) UDN
- (123) VISTA
- (124) FANTOM5
- (125) ENCODE
- (126) ProSci
- (127) Horizon
- (128) NURSA
- (129) IID
- (130) VectorBuilder
- (131) SNPedia
- (132) BRCA Exchange
- (133) CIViC
- (134) ProteoGenix
- (135) dbSUPER
- (136) TISSUES
- (137) Gene ORGANizer
- (138) abm
- (139) Human Protein Atlas
- (140) GWAS Catalog
- (141) Monarch Initiative
- (142) DataMed
- (143) HumanCyc
- (144) genomics-online
- (145) UCNEbase
- (146) EPDnew
- (147) Applied Biosystems
- (148) GlyConnect
- (149) Aminode
- (150) GeneCopoeia
- (151) GPS-Prot
- (152) RNACentral
- (153) LncRNADisease
- (154) LOVD
- (155) miR2Disease
- (156) DiseaseEnhancer
- (157) Boster Bio
- (158) Biorbyt
- (159) Biocompare
- (160) Mastermind
- (161) CTD^2 Dashboard
- (162) CraniofacialAtlas
- (163) GeneImprint
- (164) Synthego
- (165) Bio Basic
- (166) ENA
- (167) GtRNAdb
- (168) LncBase
- (169) LncBook
- (170) LNCipedia
- (171) LncRNAdb
- (172) Modomics
- (173) PDBe
- (174) Rfam
- (175) SILVA
- (176) snOPY
- (177) SRPDB
- (178) GENCODE
- (179) TarBase
- (180) MyBioSource