Aliases for LINC02352 Gene

Subcategory (RNA class) for LINC02352 Gene

lncRNA

Quality Score for this RNA gene is

15

Aliases for LINC02352 Gene

  • Long Intergenic Non-Protein Coding RNA 2352 2 3 5
  • LINC02352 2 170
  • NONHSAG016430 94
  • HSALNG0104811 169

External Ids for LINC02352 Gene

Summaries for LINC02352 Gene

GeneCards Summary for LINC02352 Gene

LINC02352 (Long Intergenic Non-Protein Coding RNA 2352) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for LINC02352 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LINC02352 Gene

Genomics for LINC02352 Gene

GeneHancer (GH) Regulatory Elements for LINC02352 Gene

Promoters and enhancers for LINC02352 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH15J031214 Promoter/Enhancer 1.8 Ensembl ENCODE CraniofacialAtlas dbSUPER 757.6 +1.6 1592 3.4 ZNF785 SIN3A CTCF RBPJ POLR2A NR2F6 MYC HLF L3MBTL2 MAX LINC02352 ENSG00000270055 ENSG00000247728 CHRNA7 ENSG00000215302 piR-39050
GH15J031212 Enhancer 0.4 dbSUPER 750.6 -1.3 -1320 1.4 HLF PRDM1 ZNF512 GATA3 LINC02352 ENSG00000270055 KLF13 ENSG00000260382 HSALNG0104809
GH15J031022 Enhancer 1.1 Ensembl ENCODE CraniofacialAtlas 5 -188.5 -188521 6.2 ZBTB40 HLF L3MBTL2 SP1 ELF3 RNF2 PKNOX1 ZNF24 NR2C1 SOX13 LOC105370752 MTMR10 ENSG00000215302 LINC02352 ENSG00000261628 ENSG00000259720 TRPM1
GH15J031248 Enhancer 0.3 Ensembl dbSUPER 5.3 +34.6 34579 1.6 MTMR10 CHRNA7 LINC02352 HSALNG0104813 lnc-OTUD7A-3
GH15J031245 Enhancer 0.2 dbSUPER 5.1 +32.4 32361 1.4 CHRNA7 LINC02352 HSALNG0104813 lnc-OTUD7A-3
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LINC02352 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LINC02352 Gene

Genomic Locations for LINC02352 Gene
chr15:31,214,222-31,225,007
(GRCh38/hg38)
Size:
10,786 bases
Orientation:
Plus strand

Genomic View for LINC02352 Gene

Genes around LINC02352 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LINC02352 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LINC02352 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LINC02352 Gene

Proteins for LINC02352 Gene

Post-translational modifications for LINC02352 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LINC02352 Gene

Domains & Families for LINC02352 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LINC02352 Gene

Function for LINC02352 Gene

Phenotypes From GWAS Catalog for LINC02352 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LINC02352 Gene

Localization for LINC02352 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LINC02352 Gene

Pathways & Interactions for LINC02352 Gene

PathCards logo

SuperPathways for LINC02352 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LINC02352 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LINC02352 Gene

Drugs & Compounds for LINC02352 Gene

No Compound Related Data Available

Transcripts for LINC02352 Gene

mRNA/cDNA for LINC02352 Gene

(1) REFSEQ mRNAs :
(1) Additional mRNA sequences :
(3) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
(8) RNACentral transcripts :
(8) LNCipedia transcripts :
(3) LncBook transcripts :
(4) NONCODE transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for LINC02352 Gene

No ASD Table

Relevant External Links for LINC02352 Gene

GeneLoc Exon Structure for
LINC02352
ECgene alternative splicing isoforms for
LINC02352

Expression for LINC02352 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LINC02352 Gene

Orthologs for LINC02352 Gene

Evolution for LINC02352 Gene

ENSEMBL:
Gene Tree for LINC02352 (if available)
TreeFam:
Gene Tree for LINC02352 (if available)

No data available for Orthologs for LINC02352 Gene

Paralogs for LINC02352 Gene

No data available for Paralogs for LINC02352 Gene

Variants for LINC02352 Gene

Sequence variations from dbSNP and Humsavar for LINC02352 Gene

SNP ID Clin Chr 15 pos Variation AA Info Type
rs1000001187 -- 31,215,008(+) T/A/C upstream_transcript_variant
rs1000046762 -- 31,216,044(+) G/T intron_variant
rs1000098557 -- 31,215,879(+) C/A upstream_transcript_variant
rs1000237132 -- 31,223,604(+) G/A intron_variant
rs1000543299 -- 31,220,377(+) A/T intron_variant

Additional Variant Information for LINC02352 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
LINC02352

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for LINC02352 Gene

Disorders for LINC02352 Gene

Additional Disease Information for LINC02352

No disorders were found for LINC02352 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for LINC02352 Gene

Publications for LINC02352 Gene

No publications were found for LINC02352 Gene.

Products for LINC02352 Gene

Sources for LINC02352 Gene