LINC02352 Gene (RNA Gene)

Long Intergenic Non-Protein Coding RNA 2352

GC15P031215
GIFtS:
9
See more...

Aliases for LINC02352 Gene

Subcategory (RNA class) for LINC02352 Gene

lncRNA

Number of RNA Genes sources:

4 / 17

Aliases for LINC02352 Gene

  • Long Intergenic Non-Protein Coding RNA 2352 2 3 5
  • LINC02352 2 5 165
  • NONHSAG016430.2 91
  • HSALNG0104811 164

External Ids for LINC02352 Gene

Previous GeneCards Identifiers for LINC02352 Gene

  • GC15P031251

Summaries for LINC02352 Gene

GeneCards Summary for LINC02352 Gene

LINC02352 (Long Intergenic Non-Protein Coding RNA 2352) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for LINC02352 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LINC02352 Gene

Genomics for LINC02352 Gene

GeneHancer (GH) Regulatory Elements Pubs

Download GeneHancer 2017 data
Promoters and enhancers for LINC02352 Gene
GeneHancer (GH) Identifier GH Type GH
Score		 GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites		 Gene Targets
GH15J031214 Promoter/Enhancer 2.2 EPDnew Ensembl ENCODE CraniofacialAtlas dbSUPER 607.6 +0.2 192 3.4 HNRNPL GATAD2A CTCF PRDM10 ZNF692 POLR2A BACH1 LARP7 GABPA ZNF143 LINC02352 ENSG00000270055 CHRNA7 piR-39050 LOC283710 TRPM1
GH15J031022 Enhancer 1.1 Ensembl ENCODE CraniofacialAtlas 5 -189.9 -189921 6.2 RNF2 TEAD4 PKNOX1 ZNF24 NR2C1 SOX13 MGA ETS1 SP1 JUND LOC105370752 MTMR10 ENSG00000215302 LINC02352 ENSG00000261628 ENSG00000259720 TRPM1
GH15J031248 Enhancer 0.3 Ensembl dbSUPER 5.3 +33.2 33179 1.6 MTMR10 CHRNA7 LINC02352 HSALNG0104813 LOC283710 lnc-OTUD7A-3 KLF13
GH15J031245 Enhancer 0.2 dbSUPER 5.1 +31.0 30961 1.4 CHRNA7 LINC02352 HSALNG0104813 LOC283710 lnc-OTUD7A-3 KLF13
GH15J031217 Promoter/Enhancer 0.7 Ensembl ENCODE dbSUPER 0.7 +2.7 2689 1 ENSG00000270055 KLF13 CHRNA7 LOC283710 LINC02352 piR-39050 TRPM1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LINC02352 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for LINC02352 Gene

Genomic Locations for LINC02352 Gene
chr15:31,215,622-31,225,007
(GRCh38/hg38)
Size:
9,386 bases
Orientation:
Plus strand

Genomic View for LINC02352 Gene

Genes around LINC02352 on UCSC Golden Path with GeneCards custom track
LINC02352 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Cytogenetic band:
LINC02352 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LINC02352 Gene
GeneLoc Logo Genomic Neighborhood • Exon Structure • Gene Density

RefSeq DNA sequence for LINC02352 Gene

Proteins for LINC02352 Gene

Products:

  1. Antibody
  2. Protein
  3. Assay

Post-translational modifications for LINC02352 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LINC02352 Gene

Domains & Families for LINC02352 Gene

Gene Families for LINC02352 Gene

HGNC:
genes like me logo Genes that share domains with LINC02352: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LINC02352 Gene

Function for LINC02352 Gene

Products:

  1. Animal Model
  2. CRISPR
  3. miRNA
  4. Inhibitory RNA
  5. Clone
  6. Cell Line

Phenotypes From GWAS Catalog for LINC02352 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LINC02352 Gene

Localization for LINC02352 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LINC02352 Gene

Pathways & Interactions for LINC02352 Gene

PathCards logo

SuperPathways for LINC02352 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LINC02352 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LINC02352 Gene

Drugs & Compounds for LINC02352 Gene

Products:

  1. Drug
No Compound Related Data Available

Transcripts for LINC02352 Gene

Products:

  1. CRISPR
  2. miRNA
  3. Inhibitory RNA
  4. Clone

Non-coding RNA (ncRNA) Transcripts from RNAcentral for LINC02352 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS00002C6A46_9606 lncRNA 468 4

Ensembl: ENST00000557928 (view in UCSC) ,

LncBook: HSALNT0218073,

LNCipedia: LINC02352:14,

NONCODE: NONHSAT041426.2,

URS0000A77336_9606 lncRNA 1030 3

HGNC: 53274,

RefSeq: NR_135834,

LNCipedia: LINC02352:7,

URS000052F734_9606 lncRNA 1450 2

Ensembl: ENST00000559292 (view in UCSC) ,

LNCipedia: LINC02352:13,

URS0000EF21E6_9606 lncRNA 2073 1

Ensembl: ENST00000654993 (view in UCSC) ,

URS00008B93F7_9606 lncRNA 297 3

LncBook: HSALNT0218074,

LNCipedia: LINC02352:15,

NONCODE: NONHSAT041427.2,

LINC02352 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Additional transcripts not in RNAcentral for LINC02352 Gene

1 NCBI additional mRNA sequence :

Alternative Splicing Database (ASD) splice patterns (SP) for LINC02352 Gene

No ASD Table

Relevant External Links for LINC02352 Gene

GeneLoc Exon Structure for
LINC02352

Expression for LINC02352 Gene

Products:

  1. Primer

Transcriptomic regulation report from SPP (The Signaling Pathways Project) for LINC02352

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LINC02352 Gene

Orthologs for LINC02352 Gene

Evolution for LINC02352 Gene

ENSEMBL:
Gene Tree for LINC02352 (if available)
TreeFam:
Gene Tree for LINC02352 (if available)

No data available for Orthologs for LINC02352 Gene

Paralogs for LINC02352 Gene

No data available for Paralogs for LINC02352 Gene

Variants for LINC02352 Gene

Additional dbSNP identifiers (rs#s) for LINC02352 Gene

Additional Variant Information for LINC02352 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
LINC02352

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for LINC02352 Gene

Disorders for LINC02352 Gene

Additional Disease Information for LINC02352

ATLAS of Genetics and Cytogenetics in Oncology and Haematology
Open Targets Platform

No disorders were found for LINC02352 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for LINC02352 Gene

Publications for LINC02352 Gene

No publications were found for LINC02352 Gene.

ExternalLinks

View latest publications for LINC02352 gene in Mastermind

Products for LINC02352 Gene

Sources for LINC02352 Gene