Aliases for LINC02333 Gene

Subcategory (RNA class) for LINC02333 Gene

lncRNA

Number of RNA Genes sources:

3 / 14

Aliases for LINC02333 Gene

  • Long Intergenic Non-Protein Coding RNA 2333 2 3 5
  • LINC02333 2 168
  • NONHSAG013572 92
  • HSALNG0097251 167

External Ids for LINC02333 Gene

Summaries for LINC02333 Gene

GeneCards Summary for LINC02333 Gene

LINC02333 (Long Intergenic Non-Protein Coding RNA 2333) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for LINC02333 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LINC02333 Gene

Genomics for LINC02333 Gene

GeneHancer (GH) Regulatory Elements for LINC02333 Gene

Promoters and enhancers for LINC02333 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH13J052343 Enhancer 0.6 ENCODE 0.4 +10.4 10430 2.4 CTCF TRIM22 CTBP1 ZNF316 MAFF FOS MAFK MAFG RFX5 GATA3 TPTE2P2 ATP7B HSALNG0097252 LOC105370207 LINC02333
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LINC02333 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LINC02333 Gene

Genomic Locations for LINC02333 Gene
chr13:52,334,295-52,341,896
(GRCh38/hg38)
Size:
7,602 bases
Orientation:
Plus strand
chr13:52,908,430-52,916,031
(GRCh37/hg19)
Size:
7,602 bases
Orientation:
Plus strand

Genomic View for LINC02333 Gene

Genes around LINC02333 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LINC02333 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LINC02333 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LINC02333 Gene

Proteins for LINC02333 Gene

Post-translational modifications for LINC02333 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LINC02333 Gene

Domains & Families for LINC02333 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LINC02333 Gene

Function for LINC02333 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LINC02333 Gene

Localization for LINC02333 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LINC02333 Gene

Pathways & Interactions for LINC02333 Gene

PathCards logo

SuperPathways for LINC02333 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for LINC02333 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LINC02333 Gene

Drugs & Compounds for LINC02333 Gene

No Compound Related Data Available

Transcripts for LINC02333 Gene

mRNA/cDNA for LINC02333 Gene

4 RNACentral transcripts :
1 REFSEQ mRNAs :
1 NCBI additional mRNA sequence :
3 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
1 NONCODE transcripts :
1 LncBook transcripts :
2 LNCipedia transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for LINC02333 Gene

No ASD Table

Relevant External Links for LINC02333 Gene

GeneLoc Exon Structure for
LINC02333

Expression for LINC02333 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LINC02333 Gene

Orthologs for LINC02333 Gene

Evolution for LINC02333 Gene

ENSEMBL:
Gene Tree for LINC02333 (if available)
TreeFam:
Gene Tree for LINC02333 (if available)

No data available for Orthologs for LINC02333 Gene

Paralogs for LINC02333 Gene

No data available for Paralogs for LINC02333 Gene

Variants for LINC02333 Gene

Additional dbSNP identifiers (rs#s) for LINC02333 Gene

Structural Variations from Database of Genomic Variants (DGV) for LINC02333 Gene

Variant ID Type Subtype PubMed ID
esv3632090 CNV gain 21293372
nsv1110855 OTHER inversion 24896259
nsv1128682 CNV duplication 24896259
nsv428288 CNV loss 18775914
nsv7242 OTHER inversion 18451855
nsv819887 CNV gain 19587683
nsv977243 CNV duplication 23825009

Additional Variant Information for LINC02333 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
LINC02333

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP and Variation tolerance for LINC02333 Gene

Disorders for LINC02333 Gene

Additional Disease Information for LINC02333

No disorders were found for LINC02333 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for LINC02333 Gene

Publications for LINC02333 Gene

No publications were found for LINC02333 Gene.

No data available for Mastermind for LINC02333 Gene

Products for LINC02333 Gene

Sources for LINC02333 Gene