Aliases for LINC02318 Gene

Data sources for LINC02318 Gene:

Subcategory (RNA class) for LINC02318 Gene

lncRNA

Aliases for LINC02318 Gene

External Ids for LINC02318 Gene

Summaries for LINC02318 Gene

GeneCards Summary for LINC02318 Gene

LINC02318 (Long Intergenic Non-Protein Coding RNA 2318) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for LINC02318 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LINC02318 Gene

Genomics for LINC02318 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for LINC02318 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH14J095573 Promoter 0.4 EPDnew 250.7 +0.0 12 0.1 NRF1 LINC02318 piR-38583-005 GLRX5 TCL1B
GH14J095576 Enhancer 0.8 Ensembl ENCODE 0.7 +3.0 2980 2.2 TRIM22 BHLHE40 ASH2L IKZF1 NR2F1 ZNF217 POU5F1 ARID3A ATF7 TBL1XR1 piR-38583-005 TCL6 GLRX5 LINC02318 piR-36588-166 TCL1B
GH14J095566 Enhancer 0.5 ENCODE 0.4 -7.2 -7161 0.2 CTCF SMC3 YY1 RAD21 ZNF143 ZNF654 piR-34822-098 ENSG00000258572 LINC02318 GLRX5 TCL1B
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LINC02318 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for LINC02318 Gene

Latest Assembly
chr14:95,573,520-95,582,505
(GRCh38/hg38)
Size:
8,986 bases
Orientation:
Plus strand

Previous Assembly
chr14:96,039,899-96,048,293
(GRCh37/hg19 by Entrez Gene)
Size:
8,395 bases
Orientation:
Plus strand

chr14:96,039,899-96,048,293
(GRCh37/hg19 by Ensembl)
Size:
8,395 bases
Orientation:
Plus strand

Genomic View for LINC02318 Gene

Genes around LINC02318 on UCSC Golden Path with GeneCards custom track
LINC02318 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Cytogenetic band:
LINC02318 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LINC02318 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LINC02318 Gene

Proteins for LINC02318 Gene

Post-translational modifications for LINC02318 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LINC02318 Gene

Domains & Families for LINC02318 Gene

Gene Families for LINC02318 Gene

genes like me logo Genes that share domains with LINC02318: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LINC02318 Gene

Function for LINC02318 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LINC02318 Gene

Localization for LINC02318 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LINC02318 Gene

Pathways & Interactions for LINC02318 Gene

PathCards logo

SuperPathways for LINC02318 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LINC02318 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LINC02318 Gene

Drugs & Compounds for LINC02318 Gene

No Compound Related Data Available

Transcripts for LINC02318 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for LINC02318 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS000047DBD8_9606 lncRNA 718 4

RefSeq: NR_146450,

Ensembl: ENST00000556346 (view in UCSC) ,

LNCipedia: LINC02318:9,

NONCODE: NONHSAT039459.2,

URS0000420C4A_9606 lncRNA 1336 3

Ensembl: ENST00000553785 (view in UCSC) ,

LNCipedia: LINC02318:12,

NONCODE: NONHSAT039461.2,

URS0000EF6A27_9606 lncRNA 1620 1

Ensembl: ENST00000668649 (view in UCSC) ,

URS0000EEBC45_9606 lncRNA 1508 1

Ensembl: ENST00000671217 (view in UCSC) ,

URS0000EF0448_9606 lncRNA 1436 1

Ensembl: ENST00000668165 (view in UCSC) ,

LINC02318 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Additional transcripts not in RNAcentral for LINC02318 Gene

1 NCBI additional mRNA sequence :

Alternative Splicing Database (ASD) splice patterns (SP) for LINC02318 Gene

No ASD Table

Relevant External Links for LINC02318 Gene

GeneLoc Exon Structure for
LINC02318

Expression for LINC02318 Gene

Transcriptomic regulation report from SPP (The Signaling Pathways Project) for LINC02318

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LINC02318 Gene

Orthologs for LINC02318 Gene

Evolution for LINC02318 Gene

ENSEMBL:
Gene Tree for LINC02318 (if available)
TreeFam:
Gene Tree for LINC02318 (if available)

No data available for Orthologs for LINC02318 Gene

Paralogs for LINC02318 Gene

No data available for Paralogs for LINC02318 Gene

Variants for LINC02318 Gene

dbSNP identifiers (rs#s) for variants without ClinVar clinical significance for LINC02318 Gene

All consequence types are included: molecular consequences (e.g. missense, synonymous), and location-based (e.g. intron, upstream).

Additional Variant Information for LINC02318 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
LINC02318

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for LINC02318 Gene

Disorders for LINC02318 Gene

Additional Disease Information for LINC02318

No disorders were found for LINC02318 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for LINC02318 Gene

Publications for LINC02318 Gene

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg RL … Mammalian Gene Collection Program Team (Proceedings of the National Academy of Sciences of the United States of America 2002) 3

Products for LINC02318 Gene

Sources for LINC02318 Gene