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Aliases for LINC02298 Gene

Subcategory (RNA class) for LINC02298 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for LINC02298 Gene

  • Long Intergenic Non-Protein Coding RNA 2298 2 3 5

External Ids for LINC02298 Gene

Summaries for LINC02298 Gene

GeneCards Summary for LINC02298 Gene

LINC02298 (Long Intergenic Non-Protein Coding RNA 2298) is an RNA Gene, and is affiliated with the non-coding RNA class.

Additional gene information for LINC02298 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LINC02298 Gene

Genomics for LINC02298 Gene

GeneHancer (GH) Regulatory Elements for LINC02298 Gene

Promoters and enhancers for LINC02298 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH14I105090 Promoter/Enhancer 1.7 Ensembl ENCODE dbSUPER 561 -1.1 -1143 4.4 HDGF PKNOX1 FOXA2 ZFP64 SIN3A ZNF2 YY1 ZNF213 ZNF207 ZNF143 LINC02298 MTA1 GPR132 RPS20P33 CDCA4 BRF1
GH14I105479 Promoter/Enhancer 2.3 EPDnew Ensembl ENCODE dbSUPER 9.9 +392.4 392395 13.2 CLOCK ZFP64 DMAP1 IRF4 YY1 SLC30A9 ZNF213 E2F8 ZNF143 SP3 ENSG00000257341 TEDC1 CRIP1 MTA1 ENSG00000257270 CDCA4 GPR132 ENSG00000258811 LINC02298 TMEM121
GH14I105086 Enhancer 1.4 Ensembl ENCODE dbSUPER 9.9 -5.8 -5757 2.9 FOXA2 ZFP64 ARID4B SIN3A ZNF2 ZNF213 ZNF207 ZNF143 SP3 REST GPR132 RPS20P33 LINC02298 CLBA1
GH14I105074 Enhancer 1.4 FANTOM5 Ensembl ENCODE dbSUPER 8.2 -18.0 -18030 3 HDGF KLF1 BACH1 KLF17 ZIC2 HIC1 ZFHX2 GLIS2 NCOR1 POLR2A GPR132 CLBA1 JAG2 NUDT14 LINC02298 PLD4 CRIP1
GH14I105682 Enhancer 1.1 ENCODE dbSUPER 9.9 +590.6 590622 3.5 HDGF PKNOX1 SMAD1 NFIB NEUROD1 YBX1 BMI1 ZBTB7B GLIS2 ZNF302 MTA1 ENSG00000257270 CDCA4 TMEM121 ENSG00000225200 PACS2 ENSG00000258811 LINC00638 AKT1 LINC02298
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around LINC02298 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LINC02298 Gene

Genomic Locations for LINC02298 Gene
chr14:105,093,609-105,099,496
(GRCh38/hg38)
Size:
5,888 bases
Orientation:
Plus strand
chr14:105,559,946-105,565,341
(GRCh37/hg19)

Genomic View for LINC02298 Gene

Genes around LINC02298 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LINC02298 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LINC02298 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LINC02298 Gene

Proteins for LINC02298 Gene

Post-translational modifications for LINC02298 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LINC02298 Gene

Domains & Families for LINC02298 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LINC02298 Gene

Function for LINC02298 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LINC02298 Gene

Localization for LINC02298 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LINC02298 Gene

Pathways & Interactions for LINC02298 Gene

SuperPathways for LINC02298 Gene

No Data Available

Interacting Proteins for LINC02298 Gene

Gene Ontology (GO) - Biological Process for LINC02298 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LINC02298 Gene

Drugs & Compounds for LINC02298 Gene

No Compound Related Data Available

Transcripts for LINC02298 Gene

mRNA/cDNA for LINC02298 Gene

(3) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for LINC02298 Gene

No ASD Table

Relevant External Links for LINC02298 Gene

GeneLoc Exon Structure for
LINC02298
ECgene alternative splicing isoforms for
LINC02298

Expression for LINC02298 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LINC02298 Gene

Orthologs for LINC02298 Gene

Evolution for LINC02298 Gene

ENSEMBL:
Gene Tree for LINC02298 (if available)
TreeFam:
Gene Tree for LINC02298 (if available)

No data available for Orthologs for LINC02298 Gene

Paralogs for LINC02298 Gene

No data available for Paralogs for LINC02298 Gene

Variants for LINC02298 Gene

Sequence variations from dbSNP and Humsavar for LINC02298 Gene

SNP ID Clin Chr 14 pos Variation AA Info Type
rs1000157315 -- 105,095,026(+) C/T intron_variant
rs1000211652 -- 105,094,714(+) C/T intron_variant
rs1000430248 -- 105,094,038(+) T/C upstream_transcript_variant
rs1000654584 -- 105,098,050(+) T/C intron_variant
rs1000763246 -- 105,093,194(+) G/A upstream_transcript_variant

Additional Variant Information for LINC02298 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
LINC02298

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for LINC02298 Gene

Disorders for LINC02298 Gene

Additional Disease Information for LINC02298

No disorders were found for LINC02298 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for LINC02298 Gene

Publications for LINC02298 Gene

No publications were found for LINC02298 Gene.

Products for LINC02298 Gene

Sources for LINC02298 Gene

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