Aliases for LINC02296 Gene

Subcategory (RNA class) for LINC02296 Gene

lncRNA

Number of RNA Genes sources:

3 / 14

Aliases for LINC02296 Gene

  • Long Intergenic Non-Protein Coding RNA 2296 2 3 5
  • LINC02296 2 168
  • HSALNG0103005 167
  • NONHSAG015642 92

External Ids for LINC02296 Gene

Summaries for LINC02296 Gene

GeneCards Summary for LINC02296 Gene

LINC02296 (Long Intergenic Non-Protein Coding RNA 2296) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for LINC02296 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LINC02296 Gene

Genomics for LINC02296 Gene

GeneHancer (GH) Regulatory Elements for LINC02296 Gene

Promoters and enhancers for LINC02296 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH14J087627 Enhancer 0.6 Ensembl ENCODE 0.4 -15.0 -14975 1.7 USF1 RFX1 ATF2 ATF7 BMI1 LINC02296 piR-35729-020
GH14J087565 Enhancer 0.5 Ensembl ENCODE 0.3 +46.5 46455 2.3 PRDM1 SMARCA4 ENSG00000259028 LINC02330 LINC02296 piR-32470-021
GH14J087636 Enhancer 0.3 ENCODE 0.4 -23.4 -23369 0.2 SMARCA4 MNT piR-35729-020 LINC02330 LINC02296
GH14J087629 Enhancer 0.3 Ensembl 0.4 -17.1 -17138 2 TEAD4 LINC02296 piR-35729-020
GH14J087643 Enhancer 0.3 Ensembl 0.3 -29.6 -29638 0.2 NFIB piR-35729-020 LINC02330 LINC02296
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LINC02296 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LINC02296 Gene

Genomic Locations for LINC02296 Gene
chr14:87,345,525-87,613,463
(GRCh38/hg38)
Size:
267,939 bases
Orientation:
Minus strand
chr14:87,819,414-88,039,366
(GRCh37/hg19)
Size:
219,953 bases
Orientation:
Minus strand

Genomic View for LINC02296 Gene

Genes around LINC02296 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LINC02296 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LINC02296 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LINC02296 Gene

Proteins for LINC02296 Gene

Post-translational modifications for LINC02296 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LINC02296 Gene

Domains & Families for LINC02296 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LINC02296 Gene

Function for LINC02296 Gene

Phenotypes From GWAS Catalog for LINC02296 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LINC02296 Gene

Localization for LINC02296 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LINC02296 Gene

Pathways & Interactions for LINC02296 Gene

PathCards logo

SuperPathways for LINC02296 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for LINC02296 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LINC02296 Gene

Drugs & Compounds for LINC02296 Gene

No Compound Related Data Available

Transcripts for LINC02296 Gene

mRNA/cDNA for LINC02296 Gene

3 RNACentral transcripts :
1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
3 NONCODE transcripts :
2 LncBook transcripts :
2 LNCipedia transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for LINC02296 Gene

No ASD Table

Relevant External Links for LINC02296 Gene

GeneLoc Exon Structure for
LINC02296

Expression for LINC02296 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LINC02296 Gene

Orthologs for LINC02296 Gene

Evolution for LINC02296 Gene

ENSEMBL:
Gene Tree for LINC02296 (if available)
TreeFam:
Gene Tree for LINC02296 (if available)

No data available for Orthologs for LINC02296 Gene

Paralogs for LINC02296 Gene

No data available for Paralogs for LINC02296 Gene

Variants for LINC02296 Gene

Additional dbSNP identifiers (rs#s) for LINC02296 Gene

Additional Variant Information for LINC02296 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
LINC02296

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for LINC02296 Gene

Disorders for LINC02296 Gene

No disorders were found for LINC02296 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LINC02296 Gene

Publications for LINC02296 Gene

No publications were found for LINC02296 Gene.

No data available for Mastermind for LINC02296 Gene

Products for LINC02296 Gene

Sources for LINC02296 Gene