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Aliases for LINC02295 Gene

Subcategory (RNA class) for LINC02295 Gene

non-coding RNA

Quality Score for this RNA gene is

13

Aliases for LINC02295 Gene

  • Long Intergenic Non-Protein Coding RNA 2295 2 3 5

External Ids for LINC02295 Gene

Summaries for LINC02295 Gene

GeneCards Summary for LINC02295 Gene

LINC02295 (Long Intergenic Non-Protein Coding RNA 2295) is an RNA Gene, and is affiliated with the non-coding RNA class.

Additional gene information for LINC02295 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LINC02295 Gene

Genomics for LINC02295 Gene

GeneHancer (GH) Regulatory Elements for LINC02295 Gene

Promoters and enhancers for LINC02295 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH14J098135 Promoter/Enhancer 1.7 UCNEbase Ensembl ENCODE dbSUPER 0.7 +3.2 3210 8.4 RAD21 CTCF POLR2A TRIM22 MNT EED IKZF1 ZNF654 ENSG00000259097 LINC02295 LOC105370655
GH14J098130 Enhancer 0.6 Ensembl dbSUPER 0.7 -4.4 -4409 0.8 IKZF1 EED RUNX3 ENSG00000259097 LINC01550 LINC02295 LOC105370655 LOC105370653
GH14J098132 Enhancer 0.4 dbSUPER 0.7 -2.8 -2761 0.6 FOS ZNF24 LINC02295 LOC105370655 LOC105370653 ENSG00000259097
GH14J098163 Enhancer 0.7 UCNEbase dbSUPER 0.3 +27.2 27201 0.2 POLR2A LOC105370655 LINC02295 ENSG00000259097
GH14J098144 Enhancer 0.5 Ensembl dbSUPER 0.4 +11.4 11391 0.4 SMAD5 LINC02295 LOC105370655 ENSG00000259097
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LINC02295 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LINC02295 Gene

Genomic Locations for LINC02295 Gene
chr14:98,136,010-98,165,347
(GRCh38/hg38)
Size:
29,338 bases
Orientation:
Plus strand
chr14:98,602,411-98,605,579
(GRCh37/hg19)
Size:
3,169 bases
Orientation:
Plus strand

Genomic View for LINC02295 Gene

Genes around LINC02295 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LINC02295 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LINC02295 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LINC02295 Gene

Proteins for LINC02295 Gene

Post-translational modifications for LINC02295 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LINC02295 Gene

Domains & Families for LINC02295 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LINC02295 Gene

Function for LINC02295 Gene

Phenotypes From GWAS Catalog for LINC02295 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LINC02295 Gene

Localization for LINC02295 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LINC02295 Gene

Pathways & Interactions for LINC02295 Gene

PathCards logo

SuperPathways for LINC02295 Gene

No Data Available

Interacting Proteins for LINC02295 Gene

Gene Ontology (GO) - Biological Process for LINC02295 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LINC02295 Gene

Drugs & Compounds for LINC02295 Gene

No Compound Related Data Available

Transcripts for LINC02295 Gene

mRNA/cDNA for LINC02295 Gene

(1) Additional mRNA sequences :
(1) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
(1) RNA Central transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for LINC02295 Gene

No ASD Table

Relevant External Links for LINC02295 Gene

GeneLoc Exon Structure for
LINC02295
ECgene alternative splicing isoforms for
LINC02295

Expression for LINC02295 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LINC02295 Gene

Orthologs for LINC02295 Gene

Evolution for LINC02295 Gene

ENSEMBL:
Gene Tree for LINC02295 (if available)
TreeFam:
Gene Tree for LINC02295 (if available)

No data available for Orthologs for LINC02295 Gene

Paralogs for LINC02295 Gene

No data available for Paralogs for LINC02295 Gene

Variants for LINC02295 Gene

Sequence variations from dbSNP and Humsavar for LINC02295 Gene

SNP ID Clin Chr 14 pos Variation AA Info Type
rs1000130026 -- 98,162,594(+) C/G/T non_coding_transcript_variant
rs1000140423 -- 98,150,468(+) C/G/T intron_variant
rs1000167841 -- 98,141,821(+) C/T intron_variant
rs1000207341 -- 98,161,257(+) G/C intron_variant
rs1000209537 -- 98,146,322(+) T/C intron_variant

Additional Variant Information for LINC02295 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
LINC02295

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for LINC02295 Gene

Disorders for LINC02295 Gene

Additional Disease Information for LINC02295

No disorders were found for LINC02295 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for LINC02295 Gene

Publications for LINC02295 Gene

  1. Robust evidence for five new Graves' disease risk loci from a staged genome-wide association analysis. (PMID: 23612905) Zhao SX … China Consortium for the Genetics of Autoimmune Thyroid Disease (Human molecular genetics 2013) 3 58

No data available for External Links for LINC02295 Gene

Products for LINC02295 Gene

Sources for LINC02295 Gene

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