Aliases for LINC02287 Gene

Subcategory (RNA class) for LINC02287 Gene

lncRNA

Quality Score for this RNA gene is

15

Aliases for LINC02287 Gene

  • Long Intergenic Non-Protein Coding RNA 2287 2 3 5
  • NONHSAG015757 94
  • HSALNG0103289 169
  • LINC02287 170

External Ids for LINC02287 Gene

Additional External Ids for LINC02287 Gene

Previous GeneCards Identifiers for LINC02287 Gene

  • GC14M092998
  • GC14M093087
  • GC14M092906

Summaries for LINC02287 Gene

GeneCards Summary for LINC02287 Gene

LINC02287 (Long Intergenic Non-Protein Coding RNA 2287) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for LINC02287 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LINC02287 Gene

Genomics for LINC02287 Gene

GeneHancer (GH) Regulatory Elements for LINC02287 Gene

Promoters and enhancers for LINC02287 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH14J092905 Enhancer 0.7 ENCODE 754.9 +1.6 1637 0.2 MLX NR2F6 ATF1 HLF TFE3 CEBPG ZNF644 CEBPA GATAD2A RXRB LINC02287 LINC02833
GH14J092931 Enhancer 0.4 dbSUPER 5.4 -25.6 -25615 4.1 POLR2A BCOR ZMYM3 SMARCA5 LINC02287 piR-58281 CHGA
GH14J092901 Enhancer 0.3 Ensembl 5.2 +4.5 4547 1.6 FOS ZNF513 ENSG00000258742 LINC02287 LINC02833
GH14J092898 Enhancer 0.5 Ensembl 0.4 +8.9 8947 1.2 IKZF1 IKZF2 BCL11A PRDM1 FOS CHGA ENSG00000258742 LINC02287 LINC02833
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LINC02287 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LINC02287 Gene

Genomic Locations for LINC02287 Gene
chr14:92,905,261-92,907,548
(GRCh38/hg38)
Size:
2,288 bases
Orientation:
Minus strand
chr14:93,372,042-93,373,827
(GRCh37/hg19)
Size:
1,786 bases
Orientation:
Minus strand

Genomic View for LINC02287 Gene

Genes around LINC02287 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LINC02287 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LINC02287 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LINC02287 Gene

Proteins for LINC02287 Gene

Post-translational modifications for LINC02287 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LINC02287 Gene

Domains & Families for LINC02287 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LINC02287 Gene

Function for LINC02287 Gene

Phenotypes From GWAS Catalog for LINC02287 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LINC02287 Gene

Localization for LINC02287 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LINC02287 Gene

Pathways & Interactions for LINC02287 Gene

PathCards logo

SuperPathways for LINC02287 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LINC02287 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LINC02287 Gene

Drugs & Compounds for LINC02287 Gene

No Compound Related Data Available

Transcripts for LINC02287 Gene

mRNA/cDNA for LINC02287 Gene

(1) Additional mRNA sequences :
(2) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
(3) RNACentral transcripts :
(3) NONCODE transcripts :
(1) LNCipedia transcripts :
(1) LncBook transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for LINC02287 Gene

No ASD Table

Relevant External Links for LINC02287 Gene

GeneLoc Exon Structure for
LINC02287
ECgene alternative splicing isoforms for
LINC02287

Expression for LINC02287 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LINC02287 Gene

Orthologs for LINC02287 Gene

Evolution for LINC02287 Gene

ENSEMBL:
Gene Tree for LINC02287 (if available)
TreeFam:
Gene Tree for LINC02287 (if available)

No data available for Orthologs for LINC02287 Gene

Paralogs for LINC02287 Gene

No data available for Paralogs for LINC02287 Gene

Variants for LINC02287 Gene

Sequence variations from dbSNP and Humsavar for LINC02287 Gene

SNP ID Clin Chr 14 pos Variation AA Info Type
rs1000464665 -- 92,908,396(-) C/G upstream_transcript_variant
rs1000955364 -- 92,909,339(-) A/T upstream_transcript_variant
rs1001615667 -- 92,906,521(-) G/A non_coding_transcript_variant
rs1001959226 -- 92,907,816(-) A/G upstream_transcript_variant
rs1002185431 -- 92,908,178(-) G/A upstream_transcript_variant

Additional Variant Information for LINC02287 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
LINC02287

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for LINC02287 Gene

Disorders for LINC02287 Gene

Additional Disease Information for LINC02287

No disorders were found for LINC02287 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for LINC02287 Gene

Publications for LINC02287 Gene

No publications were found for LINC02287 Gene.

No data available for External Links for LINC02287 Gene

Products for LINC02287 Gene

Sources for LINC02287 Gene