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Aliases for LINC02285 Gene

Subcategory (RNA class) for LINC02285 Gene

non-coding RNA

Quality Score for this RNA gene is

13

Aliases for LINC02285 Gene

  • Long Intergenic Non-Protein Coding RNA 2285 2 3 5

External Ids for LINC02285 Gene

Previous GeneCards Identifiers for LINC02285 Gene

  • GC14P102731
  • GC14P102901
  • GC14P103077

Summaries for LINC02285 Gene

GeneCards Summary for LINC02285 Gene

LINC02285 (Long Intergenic Non-Protein Coding RNA 2285) is an RNA Gene, and is affiliated with the non-coding RNA class.

Additional gene information for LINC02285 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LINC02285 Gene

Genomics for LINC02285 Gene

GeneHancer (GH) Regulatory Elements for LINC02285 Gene

Promoters and enhancers for LINC02285 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH14J101119 Promoter/Enhancer 1.1 Ensembl ENCODE 658.3 -0.1 -65 3.2 CTCF PKNOX1 RXRA ZIC2 NR2F2 GABPA POLR2A CREB1 MYC LINC02285 GC14M101121 SNORD113-2 SNORD113-1 GC14M101071
GH14J100898 Enhancer 0.9 ENCODE 5.8 -219.7 -219717 6 PKNOX1 FOXA2 MLX ARID4B SIN3A DMAP1 ARID2 SP5 ZHX2 MIER2 GC14M100899 MEG8 LINC02285 GC14P103438 ENSG00000275134 GC14P103409 ENSG00000258399
GH14J101096 Enhancer 0.7 FANTOM5 ENCODE 0.3 -22.4 -22414 3.2 ATF4 POLR2A JUN MAFK RTL1 LOC105370670 MIR656 MIR541 MIR410 MIR409 MEG9 MIR412 MIR369 MIR496
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around LINC02285 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LINC02285 Gene

Genomic Locations for LINC02285 Gene
chr14:101,120,762-101,123,545
(GRCh38/hg38)
Size:
2,784 bases
Orientation:
Plus strand
chr14:101,587,193-101,589,879
(GRCh37/hg19)
Size:
2,687 bases
Orientation:
Plus strand

Genomic View for LINC02285 Gene

Genes around LINC02285 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LINC02285 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LINC02285 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LINC02285 Gene

Proteins for LINC02285 Gene

Post-translational modifications for LINC02285 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LINC02285 Gene

Domains & Families for LINC02285 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LINC02285 Gene

Function for LINC02285 Gene

Phenotypes From GWAS Catalog for LINC02285 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LINC02285 Gene

Localization for LINC02285 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LINC02285 Gene

Pathways & Interactions for LINC02285 Gene

SuperPathways for LINC02285 Gene

No Data Available

Interacting Proteins for LINC02285 Gene

Gene Ontology (GO) - Biological Process for LINC02285 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LINC02285 Gene

Drugs & Compounds for LINC02285 Gene

No Compound Related Data Available

Transcripts for LINC02285 Gene

mRNA/cDNA for LINC02285 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :
(2) RNA Central transcripts :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for LINC02285 Gene

No ASD Table

Relevant External Links for LINC02285 Gene

GeneLoc Exon Structure for
LINC02285
ECgene alternative splicing isoforms for
LINC02285

Expression for LINC02285 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LINC02285 Gene

Orthologs for LINC02285 Gene

Evolution for LINC02285 Gene

ENSEMBL:
Gene Tree for LINC02285 (if available)
TreeFam:
Gene Tree for LINC02285 (if available)

No data available for Orthologs for LINC02285 Gene

Paralogs for LINC02285 Gene

No data available for Paralogs for LINC02285 Gene

Variants for LINC02285 Gene

Sequence variations from dbSNP and Humsavar for LINC02285 Gene

SNP ID Clin Chr 14 pos Variation AA Info Type
rs1000002761 -- 101,121,743(+) T/C intron_variant
rs1000599163 -- 101,120,586(+) A/G upstream_transcript_variant
rs1001003166 -- 101,120,820(+) A/G non_coding_transcript_variant
rs1001184813 -- 101,122,112(+) C/A intron_variant
rs1001269122 -- 101,122,446(+) G/A/C intron_variant

Additional Variant Information for LINC02285 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
LINC02285

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for LINC02285 Gene

Disorders for LINC02285 Gene

Additional Disease Information for LINC02285

No disorders were found for LINC02285 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for LINC02285 Gene

Publications for LINC02285 Gene

No publications were found for LINC02285 Gene.

Products for LINC02285 Gene

Sources for LINC02285 Gene

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