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Aliases for LINC02282 Gene

Subcategory (RNA class) for LINC02282 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for LINC02282 Gene

  • Long Intergenic Non-Protein Coding RNA 2282 2 3 5

External Ids for LINC02282 Gene

Summaries for LINC02282 Gene

GeneCards Summary for LINC02282 Gene

LINC02282 (Long Intergenic Non-Protein Coding RNA 2282) is an RNA Gene, and is affiliated with the non-coding RNA class.

Additional gene information for LINC02282 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LINC02282 Gene

Genomics for LINC02282 Gene

GeneHancer (GH) Regulatory Elements for LINC02282 Gene

Promoters and enhancers for LINC02282 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH14I028785 Enhancer 0.7 Ensembl dbSUPER 550.8 +0.3 297 0.2 POLR2A L3MBTL2 GABPB1 ZBTB33 MGA GABPA EZH2 LINC02282 LINC01551
GH14I028786 Enhancer 0.4 dbSUPER 550.8 +0.5 488 0.1 POLR2A EZH2 LINC02282 LINC01551
GH14I028783 Enhancer 0.4 dbSUPER 550.8 +1.7 1673 1.9 POLR2A EZH2 LINC02282 LINC01551
GH14I029527 Enhancer 0.9 VISTA UCNEbase 10.7 -743.0 -743027 1.7 CTCF POLR2A RAD21 SPI1 RNU11-5P LINC02282 GC14P029579
GH14I028774 Enhancer 1.2 FANTOM5 ENCODE dbSUPER 0.4 +11.1 11055 0.5 CTCF SUZ12 RAD21 ZNF2 POLR2A PRDM10 ZNF600 ZBTB20 EZH2 ZNF654 FOXG1 LINC01551 LINC02282
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around LINC02282 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LINC02282 Gene

Genomic Locations for LINC02282 Gene
chr14:28,783,491-28,785,798
(GRCh38/hg38)
Size:
2,308 bases
Orientation:
Minus strand
chr14:29,252,697-29,254,993
(GRCh37/hg19)

Genomic View for LINC02282 Gene

Genes around LINC02282 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LINC02282 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LINC02282 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LINC02282 Gene

Proteins for LINC02282 Gene

Post-translational modifications for LINC02282 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LINC02282 Gene

Domains & Families for LINC02282 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LINC02282 Gene

Function for LINC02282 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LINC02282 Gene

Localization for LINC02282 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LINC02282 Gene

Pathways & Interactions for LINC02282 Gene

SuperPathways for LINC02282 Gene

No Data Available

Interacting Proteins for LINC02282 Gene

Gene Ontology (GO) - Biological Process for LINC02282 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LINC02282 Gene

Drugs & Compounds for LINC02282 Gene

No Compound Related Data Available

Transcripts for LINC02282 Gene

mRNA/cDNA for LINC02282 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for LINC02282 Gene

No ASD Table

Relevant External Links for LINC02282 Gene

GeneLoc Exon Structure for
LINC02282
ECgene alternative splicing isoforms for
LINC02282

Expression for LINC02282 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LINC02282 Gene

Orthologs for LINC02282 Gene

Evolution for LINC02282 Gene

ENSEMBL:
Gene Tree for LINC02282 (if available)
TreeFam:
Gene Tree for LINC02282 (if available)

No data available for Orthologs for LINC02282 Gene

Paralogs for LINC02282 Gene

No data available for Paralogs for LINC02282 Gene

Variants for LINC02282 Gene

Sequence variations from dbSNP and Humsavar for LINC02282 Gene

SNP ID Clin Chr 14 pos Variation AA Info Type
rs1000303833 -- 28,785,963(-) T/C upstream_transcript_variant
rs1001385906 -- 28,784,983(-) G/A/C intron_variant
rs1002192515 -- 28,784,663(-) A/G/T non_coding_transcript_variant
rs1003196978 -- 28,783,062(-) C/T downstream_transcript_variant
rs1003553495 -- 28,787,411(-) A/G/T upstream_transcript_variant

Additional Variant Information for LINC02282 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
LINC02282

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for LINC02282 Gene

Disorders for LINC02282 Gene

Additional Disease Information for LINC02282

No disorders were found for LINC02282 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for LINC02282 Gene

Publications for LINC02282 Gene

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg RL … Mammalian Gene Collection Program Team (Proceedings of the National Academy of Sciences of the United States of America 2002) 3 58

Products for LINC02282 Gene

Sources for LINC02282 Gene

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