Aliases for LINC02269 Gene

Subcategory (RNA class) for LINC02269 Gene

lncRNA

Number of RNA Genes sources:

3 / 14

Aliases for LINC02269 Gene

  • Long Intergenic Non-Protein Coding RNA 2269 2 3 5
  • LINC02269 2 168
  • HSALNG0038611 167
  • NONHSAG039365 92
  • NONHSAG039367 92
  • Lnc-SAP30-18 168

External Ids for LINC02269 Gene

Summaries for LINC02269 Gene

GeneCards Summary for LINC02269 Gene

LINC02269 (Long Intergenic Non-Protein Coding RNA 2269) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for LINC02269 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LINC02269 Gene

Genomics for LINC02269 Gene

GeneHancer (GH) Regulatory Elements for LINC02269 Gene

Promoters and enhancers for LINC02269 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH04J173695 Enhancer 0.2 Ensembl 500.7 +0.7 690 0.4 LINC02269 lnc-HAND2-3
GH04J173680 Enhancer 0.5 VISTA Ensembl 8.7 -12.9 -12930 4.8 ATF2 PKNOX1 LINC02269 RANP6
GH04J173925 Enhancer 0.5 Ensembl 5.9 +229.3 229290 0.4 GATA3 RCOR1 CHD2 GATA2 RAD21 PAX5 LINC02269 LOC105377543 lnc-CEP44-8 lnc-FBXO8-8 ENSG00000251216
GH04J173698 Enhancer 0.6 FANTOM5 Ensembl 0.7 +3.6 3575 0.2 CREB1 JUND lnc-HAND2-3 LINC02269 piR-33730-069
GH04J173652 Enhancer 0.6 UCNEbase 0.3 -43.4 -43397 0.2 OSR2 WT1 ZNF843 PRDM6 ZNF18 FEZF1 RANP6 LINC02269 HAND2-AS1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LINC02269 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LINC02269 Gene

Genomic Locations for LINC02269 Gene
chr4:173,695,511-174,001,488
(GRCh38/hg38)
Size:
305,978 bases
Orientation:
Plus strand

Genomic View for LINC02269 Gene

Genes around LINC02269 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LINC02269 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LINC02269 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LINC02269 Gene

Proteins for LINC02269 Gene

Post-translational modifications for LINC02269 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LINC02269 Gene

Domains & Families for LINC02269 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LINC02269 Gene

Function for LINC02269 Gene

Phenotypes From GWAS Catalog for LINC02269 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LINC02269 Gene

Localization for LINC02269 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LINC02269 Gene

Pathways & Interactions for LINC02269 Gene

PathCards logo

SuperPathways for LINC02269 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for LINC02269 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LINC02269 Gene

Drugs & Compounds for LINC02269 Gene

No Compound Related Data Available

Transcripts for LINC02269 Gene

mRNA/cDNA for LINC02269 Gene

32 RNACentral transcripts :
1 REFSEQ mRNAs :
25 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
9 NONCODE transcripts :
6 LncBook transcripts :
5 LNCipedia transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for LINC02269 Gene

No ASD Table

Relevant External Links for LINC02269 Gene

GeneLoc Exon Structure for
LINC02269

Expression for LINC02269 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LINC02269 Gene

Orthologs for LINC02269 Gene

Evolution for LINC02269 Gene

ENSEMBL:
Gene Tree for LINC02269 (if available)
TreeFam:
Gene Tree for LINC02269 (if available)

No data available for Orthologs for LINC02269 Gene

Paralogs for LINC02269 Gene

No data available for Paralogs for LINC02269 Gene

Variants for LINC02269 Gene

Additional dbSNP identifiers (rs#s) for LINC02269 Gene

Additional Variant Information for LINC02269 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
LINC02269

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for LINC02269 Gene

Disorders for LINC02269 Gene

Additional Disease Information for LINC02269

No disorders were found for LINC02269 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for LINC02269 Gene

Publications for LINC02269 Gene

  1. The CCND1 c.870G>A polymorphism is a risk factor for t(11;14)(q13;q32) multiple myeloma. (PMID: 23502783) Weinhold N … Hemminki K (Nature genetics 2013) 3 54

No data available for Mastermind for LINC02269 Gene

Products for LINC02269 Gene

Sources for LINC02269 Gene