Aliases for LINC02257 Gene

Data sources for LINC02257 Gene:

Subcategory (RNA class) for LINC02257 Gene

lncRNA

Aliases for LINC02257 Gene

External Ids for LINC02257 Gene

Summaries for LINC02257 Gene

GeneCards Summary for LINC02257 Gene

LINC02257 (Long Intergenic Non-Protein Coding RNA 2257) is an RNA Gene, and is affiliated with the lncRNA class.

Rfam classification for LINC02257 Gene

Additional gene information for LINC02257 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for LINC02257 Gene

Genomics for LINC02257 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for LINC02257 Gene
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LINC02257 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for LINC02257 Gene

Latest Assembly
chr1:221,880,980-221,978,524
(GRCh38/hg38)
Size:
97,545 bases
Orientation:
Minus strand

Previous Assembly
chr1:222,086,987-222,151,862
(GRCh37/hg19 by Entrez Gene)
Size:
64,876 bases
Orientation:
Minus strand

chr1:222,054,323-222,151,865
(GRCh37/hg19 by Ensembl)
Size:
97,543 bases
Orientation:
Minus strand

Genomic View for LINC02257 Gene

Genes around LINC02257 on UCSC Golden Path with GeneCards custom track
LINC02257 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Cytogenetic band:
LINC02257 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LINC02257 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LINC02257 Gene

Proteins for LINC02257 Gene

Post-translational modifications for LINC02257 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LINC02257 Gene

Domains & Families for LINC02257 Gene

Gene Families for LINC02257 Gene

genes like me logo Genes that share domains with LINC02257: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LINC02257 Gene

Function for LINC02257 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LINC02257 Gene

Localization for LINC02257 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LINC02257 Gene

Pathways & Interactions for LINC02257 Gene

PathCards logo

SuperPathways for LINC02257 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LINC02257 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LINC02257 Gene

Drugs & Compounds for LINC02257 Gene

No Compound Related Data Available

Transcripts for LINC02257 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for LINC02257 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS00000C8FDD_9606 lncRNA 720 4

Ensembl: ENST00000433576 (view in UCSC) ,

LncBook: HSALNT0022469,

LNCipedia: LINC02257:5,

NONCODE: NONHSAT009648.2,

URS0000348BB6_9606 lncRNA 605 4

Ensembl: ENST00000412445 (view in UCSC) ,

LncBook: HSALNT0022474,

LNCipedia: LINC02257:4,

NONCODE: NONHSAT009649.2,

URS0000BC4493_9606 lncRNA 605 1

RefSeq: NR_149057,

URS0001BF2897_9606 lncRNA 14774 1

LncBook: HSALNT0022459,

URS0001BE76C9_9606 lncRNA 6660 1

LncBook: HSALNT0022464,

LINC02257 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Additional transcripts not in RNAcentral for LINC02257 Gene

2 NCBI additional mRNA sequence :

Alternative Splicing Database (ASD) splice patterns (SP) for LINC02257 Gene

No ASD Table

Relevant External Links for LINC02257 Gene

GeneLoc Exon Structure for
LINC02257

Expression for LINC02257 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LINC02257 Gene

Orthologs for LINC02257 Gene

Evolution for LINC02257 Gene

ENSEMBL:
Gene Tree for LINC02257 (if available)
TreeFam:
Gene Tree for LINC02257 (if available)

No data available for Orthologs for LINC02257 Gene

Paralogs for LINC02257 Gene

No data available for Paralogs for LINC02257 Gene

Variants for LINC02257 Gene

dbSNP identifiers (rs#s) for variants without ClinVar clinical significance for LINC02257 Gene

All consequence types are included: molecular consequences (e.g. missense, synonymous), and location-based (e.g. intron, upstream).

Additional Variant Information for LINC02257 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
LINC02257

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for LINC02257 Gene

Disorders for LINC02257 Gene

Additional Disease Information for LINC02257

No disorders were found for LINC02257 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for LINC02257 Gene

Publications for LINC02257 Gene

No publications were found for LINC02257 Gene.

Products for LINC02257 Gene

Sources for LINC02257 Gene