Aliases for LINC02195 Gene

Subcategory (RNA class) for LINC02195 Gene

lncRNA

Number of RNA Genes sources:

3 / 17

Aliases for LINC02195 Gene

  • Long Intergenic Non-Protein Coding RNA 2195 2 3 5
  • LINC02195 2 5 165
  • NONHSAG018951.2 91
  • HSALNG0110397 164

External Ids for LINC02195 Gene

Summaries for LINC02195 Gene

GeneCards Summary for LINC02195 Gene

LINC02195 (Long Intergenic Non-Protein Coding RNA 2195) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for LINC02195 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LINC02195 Gene

Genomics for LINC02195 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for LINC02195 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH16J026606 Enhancer 0.3 FANTOM5 600.7 +1.5 1486 0.2 POLR2A LINC02195 piR-50443-143 ENSG00000286712 C16orf82 HS3ST4
GH16J026597 Enhancer 1 FANTOM5 Ensembl ENCODE 7.9 +8.8 8754 2.6 CREB1 ZNF629 JUND EP300 FOSL1 STAT5A GATA3 ATF4 DPF2 CEBPG LINC02195 piR-50443-143 ENSG00000286712 C16orf82 HS3ST4
GH16J026614 Enhancer 0.3 FANTOM5 0.4 -7.0 -6961 0.2 RAD21 piR-50852-057 LINC02195 C16orf82 HS3ST4
GH16J026591 Enhancer 0.3 Ensembl 0.4 +15.8 15849 0.4 ATF4 LINC02195 piR-50443-143 ENSG00000286712 C16orf82 HS3ST4
GH16J026593 Enhancer 0.2 FANTOM5 0.4 +13.8 13811 0.2 LINC02195 piR-50443-143 ENSG00000286712 C16orf82 HS3ST4
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LINC02195 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for LINC02195 Gene

Genomic Locations for LINC02195 Gene
chr16:26,584,454-26,607,650
(GRCh38/hg38)
Size:
23,197 bases
Orientation:
Minus strand
chr16:26,596,076-26,606,134
(GRCh37/hg19)
Size:
10,059 bases
Orientation:
Minus strand

Genomic View for LINC02195 Gene

Genes around LINC02195 on UCSC Golden Path with GeneCards custom track
LINC02195 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Cytogenetic band:
LINC02195 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LINC02195 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LINC02195 Gene

Proteins for LINC02195 Gene

Post-translational modifications for LINC02195 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LINC02195 Gene

Domains & Families for LINC02195 Gene

Gene Families for LINC02195 Gene

genes like me logo Genes that share domains with LINC02195: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LINC02195 Gene

Function for LINC02195 Gene

Phenotypes From GWAS Catalog for LINC02195 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LINC02195 Gene

Localization for LINC02195 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LINC02195 Gene

Pathways & Interactions for LINC02195 Gene

PathCards logo

SuperPathways for LINC02195 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LINC02195 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LINC02195 Gene

Drugs & Compounds for LINC02195 Gene

No Compound Related Data Available

Transcripts for LINC02195 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for LINC02195 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS0000136916_9606 lncRNA 294 5

HGNC: 53058,

Ensembl: ENST00000443373 (view in UCSC) ,

LncBook: HSALNT0229169,

LNCipedia: LINC02195:3,

NONCODE: NONHSAT141423.2,

URS0000E9672F_9606 lncRNA 8491 1

LncBook: HSALNT0229167,

LINC02195 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for LINC02195 Gene

No ASD Table

Relevant External Links for LINC02195 Gene

GeneLoc Exon Structure for
LINC02195

No data available for mRNA/cDNA for LINC02195 Gene

Expression for LINC02195 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LINC02195 Gene

Orthologs for LINC02195 Gene

Evolution for LINC02195 Gene

ENSEMBL:
Gene Tree for LINC02195 (if available)
TreeFam:
Gene Tree for LINC02195 (if available)

No data available for Orthologs for LINC02195 Gene

Paralogs for LINC02195 Gene

No data available for Paralogs for LINC02195 Gene

Variants for LINC02195 Gene

Additional dbSNP identifiers (rs#s) for LINC02195 Gene

Additional Variant Information for LINC02195 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
LINC02195

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for LINC02195 Gene

Disorders for LINC02195 Gene

Additional Disease Information for LINC02195

No disorders were found for LINC02195 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for LINC02195 Gene

Publications for LINC02195 Gene

No publications were found for LINC02195 Gene.

No data available for Mastermind for LINC02195 Gene

Products for LINC02195 Gene

Sources for LINC02195 Gene