Aliases for LINC02194 Gene

Subcategory (RNA class) for LINC02194 Gene

lncRNA

Number of RNA Genes sources:

3 / 17

Aliases for LINC02194 Gene

  • Long Intergenic Non-Protein Coding RNA 2194 2 3 5
  • LINC2194 2 3 5 165
  • NONHSAG018911.2 91
  • HSALNG0110286 164

External Ids for LINC02194 Gene

Previous HGNC Symbols for LINC02194 Gene

  • LINC2194

Summaries for LINC02194 Gene

GeneCards Summary for LINC02194 Gene

LINC02194 (Long Intergenic Non-Protein Coding RNA 2194) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for LINC02194 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LINC02194 Gene

Genomics for LINC02194 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for LINC02194 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH16J024253 Enhancer 0.8 Ensembl ENCODE 0.4 +17.1 17102 0.8 CTCF FOXA1 REST RAD21 TRIM22 EZH2 ATF7 FOXK2 ZNF444 SMC3 CACNG3 piR-32214-250 LINC02194 PRKCB
GH16J024214 Enhancer 0.5 Ensembl 0.4 -20.4 -20382 1 NR2C1 NFIC NR2F1 NR2F6 ZBTB40 lnc-ERN2-2 LINC02194 CACNG3 PRKCB
GH16J024208 Enhancer 0.5 Ensembl ENCODE 0.3 -27.3 -27260 1.2 EZH2 SMARCA4 ENSG00000279554 lnc-ERN2-2 LINC02194 CACNG3 PRKCB
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LINC02194 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for LINC02194 Gene

Genomic Locations for LINC02194 Gene
chr16:24,236,083-24,252,863
(GRCh38/hg38)
Size:
16,781 bases
Orientation:
Plus strand
chr16:24,247,425-24,264,184
(GRCh37/hg19)
Size:
16,760 bases
Orientation:
Plus strand

Genomic View for LINC02194 Gene

Genes around LINC02194 on UCSC Golden Path with GeneCards custom track
LINC02194 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Cytogenetic band:
LINC02194 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LINC02194 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LINC02194 Gene

Proteins for LINC02194 Gene

Post-translational modifications for LINC02194 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LINC02194 Gene

Domains & Families for LINC02194 Gene

Gene Families for LINC02194 Gene

genes like me logo Genes that share domains with LINC02194: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LINC02194 Gene

Function for LINC02194 Gene

Phenotypes From GWAS Catalog for LINC02194 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LINC02194 Gene

Localization for LINC02194 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LINC02194 Gene

Pathways & Interactions for LINC02194 Gene

PathCards logo

SuperPathways for LINC02194 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LINC02194 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LINC02194 Gene

Drugs & Compounds for LINC02194 Gene

No Compound Related Data Available

Transcripts for LINC02194 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for LINC02194 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS000009C385_9606 lncRNA 506 4

Ensembl: ENST00000567624 (view in UCSC) ,

LncBook: HSALNT0228956,

LNCipedia: LINC2194:9,

NONCODE: NONHSAT141153.2,

URS000022729D_9606 lncRNA 454 4

Ensembl: ENST00000567127 (view in UCSC) ,

LncBook: HSALNT0228954,

LNCipedia: LINC2194:8,

NONCODE: NONHSAT141152.2,

URS0000BC4495_9606 lncRNA 451 2

HGNC: 53057,

RefSeq: NR_146569,

URS00008BA1F1_9606 lncRNA 220 3

LncBook: HSALNT0228952,

LNCipedia: LINC2194:7,

NONCODE: NONHSAT141151.2,

URS00008BEDF9_9606 lncRNA 215 3

LncBook: HSALNT0228957,

LNCipedia: LINC2194:10,

NONCODE: NONHSAT141154.2,

LINC02194 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Additional transcripts not in RNAcentral for LINC02194 Gene

1 NCBI additional mRNA sequence :

Alternative Splicing Database (ASD) splice patterns (SP) for LINC02194 Gene

No ASD Table

Relevant External Links for LINC02194 Gene

GeneLoc Exon Structure for
LINC02194

Expression for LINC02194 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LINC02194 Gene

Orthologs for LINC02194 Gene

Evolution for LINC02194 Gene

ENSEMBL:
Gene Tree for LINC02194 (if available)
TreeFam:
Gene Tree for LINC02194 (if available)

No data available for Orthologs for LINC02194 Gene

Paralogs for LINC02194 Gene

No data available for Paralogs for LINC02194 Gene

Variants for LINC02194 Gene

Additional dbSNP identifiers (rs#s) for LINC02194 Gene

Additional Variant Information for LINC02194 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
LINC02194

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for LINC02194 Gene

Disorders for LINC02194 Gene

Additional Disease Information for LINC02194

No disorders were found for LINC02194 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for LINC02194 Gene

Publications for LINC02194 Gene

No publications were found for LINC02194 Gene.

No data available for Mastermind for LINC02194 Gene

Products for LINC02194 Gene

Sources for LINC02194 Gene