Aliases for LINC02193 Gene

Subcategory (RNA class) for LINC02193 Gene

lncRNA

Number of RNA Genes sources:

3 / 17

Aliases for LINC02193 Gene

  • Long Intergenic Non-Protein Coding RNA 2193 2 3 5
  • LINC02193 2 5
  • NONHSAG020393.2 91
  • HSALNG0113694 164
  • Lnc-GAS8-1 165

External Ids for LINC02193 Gene

Previous GeneCards Identifiers for LINC02193 Gene

  • GC16P090181
  • GC16P090182
  • GC16P090184
  • GC16P090270
  • GC16P090176
  • GC16P090177
  • GC16P090178
  • GC16P090179
  • GC16P090180

Summaries for LINC02193 Gene

GeneCards Summary for LINC02193 Gene

LINC02193 (Long Intergenic Non-Protein Coding RNA 2193) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for LINC02193 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LINC02193 Gene

Genomics for LINC02193 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for LINC02193 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH16J090174 Enhancer 0.5 Ensembl 600.7 +1.3 1283 0.6 ATF7 ZFHX2 ATF3 ATF2 EGR2 CICP25 LINC02193 piR-32609-010 piR-36559-008 piR-52012-010 piR-59058 FAM157C PRDM7
GH16J090173 Promoter 0.3 EPDnew 600.7 0.0 -49 0.1 LINC02193 piR-32609-010 piR-52012-010 piR-43121-010 piR-56962-006 piR-60222-010 CICP25 FAM157C PRDM7
GH16J089593 Enhancer 0.5 Ensembl ENCODE 4.4 -579.4 -579416 1.6 ZNF10 ZBTB33 hsa-miR-5095-201 CDK10 DBNDD1 TUBB3 LINC02193 lnc-CHMP1A-3 CPNE7 DPEP1
GH16J090215 Enhancer 0.5 Ensembl 0.3 +42.6 42584 1.6 REST CTCF RAD21 NFIC NFIB ZNF654 ARID2 HSALNG0010917-007 piR-57308-003 DBNDD1 LOC107987240 LINC02193 PRDM7
GH16J090223 Enhancer 0.2 Ensembl 0.2 +50.9 50884 0.2 HSALNG0113698 piR-32350-002 LINC02193 PRDM7
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LINC02193 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for LINC02193 Gene

Genomic Locations for LINC02193 Gene
chr16:90,173,217-90,225,200
(GRCh38/hg38)
Size:
51,984 bases
Orientation:
Plus strand
chr16:90,252,405-90,289,086
(GRCh37/hg19)
Size:
36,682 bases
Orientation:
Plus strand

Genomic View for LINC02193 Gene

Genes around LINC02193 on UCSC Golden Path with GeneCards custom track
LINC02193 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Cytogenetic band:
LINC02193 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LINC02193 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LINC02193 Gene

Proteins for LINC02193 Gene

Post-translational modifications for LINC02193 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LINC02193 Gene

Domains & Families for LINC02193 Gene

Gene Families for LINC02193 Gene

genes like me logo Genes that share domains with LINC02193: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LINC02193 Gene

Function for LINC02193 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LINC02193 Gene

Localization for LINC02193 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LINC02193 Gene

Pathways & Interactions for LINC02193 Gene

PathCards logo

SuperPathways for LINC02193 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LINC02193 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LINC02193 Gene

Drugs & Compounds for LINC02193 Gene

No Compound Related Data Available

Transcripts for LINC02193 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for LINC02193 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS00005F3BD0_9606 lncRNA 2056 4

Ensembl: ENST00000568418 (view in UCSC) ,

LncBook: HSALNT0235625,

LNCipedia: lnc-GAS8-1:1,

NONCODE: NONHSAT144656.2,

URS000057D300_9606 lncRNA 719 4

Ensembl: ENST00000566864 (view in UCSC) ,

LncBook: HSALNT0235632,

LNCipedia: lnc-GAS8-1:6,

NONCODE: NONHSAT144660.2,

URS000000D7BD_9606 lncRNA 377 4

Ensembl: ENST00000565635 (view in UCSC) ,

LncBook: HSALNT0235631,

LNCipedia: lnc-GAS8-1:5,

NONCODE: NONHSAT144659.2,

URS0000AAB0DE_9606 lncRNA 723 3

Ensembl: ENST00000621799 (view in UCSC) ,

LncBook: HSALNT0235622,

LNCipedia: lnc-GAS8-1:10,

URS0000EF582F_9606 lncRNA 2328 2

HGNC: 53055,

Ensembl: ENST00000568947 (view in UCSC) ,

LINC02193 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for LINC02193 Gene

No ASD Table

Relevant External Links for LINC02193 Gene

GeneLoc Exon Structure for
LINC02193

No data available for mRNA/cDNA for LINC02193 Gene

Expression for LINC02193 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LINC02193 Gene

Orthologs for LINC02193 Gene

Evolution for LINC02193 Gene

ENSEMBL:
Gene Tree for LINC02193 (if available)
TreeFam:
Gene Tree for LINC02193 (if available)

No data available for Orthologs for LINC02193 Gene

Paralogs for LINC02193 Gene

No data available for Paralogs for LINC02193 Gene

Variants for LINC02193 Gene

Additional dbSNP identifiers (rs#s) for LINC02193 Gene

Additional Variant Information for LINC02193 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
LINC02193

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for LINC02193 Gene

Disorders for LINC02193 Gene

Additional Disease Information for LINC02193

No disorders were found for LINC02193 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for LINC02193 Gene

Publications for LINC02193 Gene

No publications were found for LINC02193 Gene.

No data available for Mastermind for LINC02193 Gene

Products for LINC02193 Gene

Sources for LINC02193 Gene