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Aliases for LINC02191 Gene

Subcategory (RNA class) for LINC02191 Gene

non-coding RNA

Quality Score for this RNA gene is

13

Aliases for LINC02191 Gene

  • Long Intergenic Non-Protein Coding RNA 2191 2 3 5
  • CTA-249B10.1 3

External Ids for LINC02191 Gene

Summaries for LINC02191 Gene

GeneCards Summary for LINC02191 Gene

LINC02191 (Long Intergenic Non-Protein Coding RNA 2191) is an RNA Gene, and is affiliated with the non-coding RNA class.

Additional gene information for LINC02191 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LINC02191 Gene

Genomics for LINC02191 Gene

GeneHancer (GH) Regulatory Elements for LINC02191 Gene

Promoters and enhancers for LINC02191 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH16J025108 Promoter/Enhancer 2.3 EPDnew FANTOM5 Ensembl ENCODE 14.6 +322.8 322835 3.7 PKNOX1 ARID4B SIN3A DMAP1 ZNF2 YY1 ZNF143 FOS KLF13 SP3 LCMT1 LCMT1-AS1 RBBP6 ARHGAP17 LINC02191 LINC2194 LOC100420641 LCMT1-AS2 HMGN2P3 LOC100421173
GH16J025256 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE 14.6 +175.8 175843 2.8 MLX ZFP64 FEZF1 DMAP1 IRF4 YY1 ZNF213 ZNF416 ZNF143 ZNF548 ZKSCAN2 ENSG00000274925 GC16P026016 RBBP6 LOC554206 HMGN2P3 ARHGAP17 ENSG00000261669 SCML2P2 LCMT1-AS2
GH16J025047 Enhancer 1.8 FANTOM5 Ensembl ENCODE dbSUPER 14.6 +383.3 383349 5.3 HDGF PKNOX1 SMAD1 ARNT ZFP64 SIN3A FEZF1 ZNF2 YY1 POLR2B RBBP6 HMGN2P3 ENSG00000261669 LOC554206 ARHGAP17 LCMT1-AS2 LINC02191 LOC100420641 LINC2194 LOC100421169
GH16J025414 Enhancer 0.7 ENCODE 0.4 +19.5 19471 0.2 PKNOX1 JUN MAX SIN3A CEBPG CTBP1 GATA3 POLR2A FOS SMARCE1 LINC02191 GC16M025379
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LINC02191 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LINC02191 Gene

Genomic Locations for LINC02191 Gene
chr16:25,418,283-25,433,666
(GRCh38/hg38)
Size:
15,384 bases
Orientation:
Minus strand
chr16:25,431,135-25,435,490
(GRCh37/hg19)
Size:
4,356 bases
Orientation:
Minus strand

Genomic View for LINC02191 Gene

Genes around LINC02191 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LINC02191 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LINC02191 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LINC02191 Gene

Proteins for LINC02191 Gene

Post-translational modifications for LINC02191 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LINC02191 Gene

Domains & Families for LINC02191 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LINC02191 Gene

Function for LINC02191 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LINC02191 Gene

Localization for LINC02191 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LINC02191 Gene

Pathways & Interactions for LINC02191 Gene

SuperPathways for LINC02191 Gene

No Data Available

Interacting Proteins for LINC02191 Gene

Gene Ontology (GO) - Biological Process for LINC02191 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LINC02191 Gene

Drugs & Compounds for LINC02191 Gene

No Compound Related Data Available

Transcripts for LINC02191 Gene

mRNA/cDNA for LINC02191 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :
(1) RNA Central transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for LINC02191 Gene

No ASD Table

Relevant External Links for LINC02191 Gene

GeneLoc Exon Structure for
LINC02191
ECgene alternative splicing isoforms for
LINC02191

Expression for LINC02191 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LINC02191 Gene

Orthologs for LINC02191 Gene

Evolution for LINC02191 Gene

ENSEMBL:
Gene Tree for LINC02191 (if available)
TreeFam:
Gene Tree for LINC02191 (if available)

No data available for Orthologs for LINC02191 Gene

Paralogs for LINC02191 Gene

No data available for Paralogs for LINC02191 Gene

Variants for LINC02191 Gene

Sequence variations from dbSNP and Humsavar for LINC02191 Gene

SNP ID Clin Chr 16 pos Variation AA Info Type
rs1000027473 -- 25,433,534(-) C/G non_coding_transcript_variant
rs1000032450 -- 25,420,901(-) T/C intron_variant
rs1000233618 -- 25,422,470(-) G/T intron_variant
rs1000487519 -- 25,434,514(-) G/A upstream_transcript_variant
rs1000677973 -- 25,417,816(-) C/T downstream_transcript_variant

Additional Variant Information for LINC02191 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
LINC02191

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for LINC02191 Gene

Disorders for LINC02191 Gene

No disorders were found for LINC02191 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LINC02191 Gene

Publications for LINC02191 Gene

No publications were found for LINC02191 Gene.

Products for LINC02191 Gene

Sources for LINC02191 Gene

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