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Aliases for LINC02185 Gene

Subcategory (RNA class) for LINC02185 Gene

non-coding RNA

Quality Score for this RNA gene is

13

Aliases for LINC02185 Gene

  • Long Intergenic Non-Protein Coding RNA 2185 2 3 5

External Ids for LINC02185 Gene

Summaries for LINC02185 Gene

GeneCards Summary for LINC02185 Gene

LINC02185 (Long Intergenic Non-Protein Coding RNA 2185) is an RNA Gene, and is affiliated with the non-coding RNA class.

Additional gene information for LINC02185 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LINC02185 Gene

Genomics for LINC02185 Gene

GeneHancer (GH) Regulatory Elements for LINC02185 Gene

Promoters and enhancers for LINC02185 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH16J014012 Promoter/Enhancer 1.5 Ensembl ENCODE 600.7 +1.2 1225 3.8 ELF3 CEBPG ZSCAN21 SP7 PPARG PRDM1 MZF1 GLIS2 POLR2A ZNF488 LINC02185 ENSG00000263234
GH16J013993 Enhancer 1.2 FANTOM5 Ensembl ENCODE 0.3 +21.5 21494 1.8 ZNF24 SP1 ZNF644 RXRA ZNF600 PRDM10 CEBPA GATAD2A RXRB ZNF629 ENSG00000261819 PLA2G10 LINC02185 ENSG00000263234
GH16J014007 Enhancer 0.9 Ensembl ENCODE 0.4 +8.2 8217 1.6 BACH1 MAFK JUND IKZF2 ZEB2 TRIM22 ZNF316 ZXDB DPF2 NFE2 LINC02185 ENSG00000263234
GH16J014011 Enhancer 0.5 ENCODE 0.7 +3.9 3949 0.2 PRDM1 ATF7 ATF2 FOXA2 ZFHX2 EGR2 LINC02185 ENSG00000263234
GH16J014002 Enhancer 0.8 ENCODE 0.4 +12.0 11978 2.4 PRDM1 EGR1 IKZF1 CREB1 RFX1 ZNF600 PRDM10 IKZF2 ZIC2 TARDBP LINC02185 ENSG00000263234
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LINC02185 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LINC02185 Gene

Genomic Locations for LINC02185 Gene
chr16:14,009,276-14,016,018
(GRCh38/hg38)
Size:
6,743 bases
Orientation:
Minus strand
chr16:14,103,137-14,109,873
(GRCh37/hg19)
Size:
6,737 bases
Orientation:
Minus strand

Genomic View for LINC02185 Gene

Genes around LINC02185 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LINC02185 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LINC02185 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LINC02185 Gene

Proteins for LINC02185 Gene

Post-translational modifications for LINC02185 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LINC02185 Gene

Domains & Families for LINC02185 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LINC02185 Gene

Function for LINC02185 Gene

Phenotypes From GWAS Catalog for LINC02185 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LINC02185 Gene

Localization for LINC02185 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LINC02185 Gene

Pathways & Interactions for LINC02185 Gene

PathCards logo

SuperPathways for LINC02185 Gene

No Data Available

Interacting Proteins for LINC02185 Gene

Gene Ontology (GO) - Biological Process for LINC02185 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LINC02185 Gene

Drugs & Compounds for LINC02185 Gene

No Compound Related Data Available

Transcripts for LINC02185 Gene

mRNA/cDNA for LINC02185 Gene

(1) Additional mRNA sequences :
(2) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
(3) RNA Central transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for LINC02185 Gene

No ASD Table

Relevant External Links for LINC02185 Gene

GeneLoc Exon Structure for
LINC02185
ECgene alternative splicing isoforms for
LINC02185

Expression for LINC02185 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LINC02185 Gene

Orthologs for LINC02185 Gene

Evolution for LINC02185 Gene

ENSEMBL:
Gene Tree for LINC02185 (if available)
TreeFam:
Gene Tree for LINC02185 (if available)

No data available for Orthologs for LINC02185 Gene

Paralogs for LINC02185 Gene

No data available for Paralogs for LINC02185 Gene

Variants for LINC02185 Gene

Sequence variations from dbSNP and Humsavar for LINC02185 Gene

SNP ID Clin Chr 16 pos Variation AA Info Type
rs1000095023 -- 14,010,933(-) T/C intron_variant
rs1000363121 -- 14,016,641(-) C/T upstream_transcript_variant
rs1000969983 -- 14,015,092(-) G/A intron_variant
rs1001096616 -- 14,009,435(-) T/C non_coding_transcript_variant
rs1001125324 -- 14,017,069(-) T/G upstream_transcript_variant

Structural Variations from Database of Genomic Variants (DGV) for LINC02185 Gene

Variant ID Type Subtype PubMed ID
nsv457423 CNV gain 19166990
nsv571507 CNV gain 21841781

Additional Variant Information for LINC02185 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
LINC02185

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for LINC02185 Gene

Disorders for LINC02185 Gene

Additional Disease Information for LINC02185

No disorders were found for LINC02185 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for LINC02185 Gene

Publications for LINC02185 Gene

No publications were found for LINC02185 Gene.

No data available for External Links for LINC02185 Gene

Products for LINC02185 Gene

Sources for LINC02185 Gene

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