Aliases for LINC02183 Gene

Subcategory (RNA class) for LINC02183 Gene

lncRNA

Number of RNA Genes sources:

1 / 14

Aliases for LINC02183 Gene

  • Long Intergenic Non-Protein Coding RNA 2183 2 3 5
  • LINC02183 2 168

External Ids for LINC02183 Gene

Summaries for LINC02183 Gene

GeneCards Summary for LINC02183 Gene

LINC02183 (Long Intergenic Non-Protein Coding RNA 2183) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for LINC02183 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LINC02183 Gene

Genomics for LINC02183 Gene

GeneHancer (GH) Regulatory Elements for LINC02183 Gene

Promoters and enhancers for LINC02183 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH16J054541 Enhancer 1 VISTA UCNEbase 0.4 +16.1 16110 2 EP300 GATA3 TAL1 RCOR1 TEAD4 CHD2 GATA2 POLR2A MMP2 LINC02183 ENSG00000286845
GH16J054545 Enhancer 0.7 VISTA Ensembl CraniofacialAtlas 0.4 +12.8 12799 1 EP300 PKNOX1 POLR2A LINC02183 ENSG00000286845
GH16J054512 Enhancer 0.8 Ensembl ENCODE CraniofacialAtlas 0.3 +47.8 47799 3 EP300 POLR2A EGR1 PRDM6 ZNF768 SMARCA4 EZH2 FOXA1 ENSG00000286845 LINC02183
GH16J054506 Enhancer 0.7 VISTA CraniofacialAtlas 0.2 +52.2 52188 1.2 ZNF341 OSR2 EZH2 ZNF398 SMARCA4 MAZ GATA2 MZF1 POLR2A EMSY ENSG00000286845 LINC02183
GH16J054505 Enhancer 0.6 UCNEbase 0.2 +53.0 52996 0.2 ZNF316 PRDM6 MAFK EMSY ENSG00000286845 LINC02183
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LINC02183 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LINC02183 Gene

Genomic Locations for LINC02183 Gene
chr16:54,542,808-54,559,100
(GRCh38/hg38)
Size:
16,293 bases
Orientation:
Minus strand

Genomic View for LINC02183 Gene

Genes around LINC02183 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LINC02183 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LINC02183 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LINC02183 Gene

Proteins for LINC02183 Gene

Post-translational modifications for LINC02183 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LINC02183 Gene

Domains & Families for LINC02183 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LINC02183 Gene

Function for LINC02183 Gene

Phenotypes From GWAS Catalog for LINC02183 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LINC02183 Gene

Localization for LINC02183 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LINC02183 Gene

Pathways & Interactions for LINC02183 Gene

PathCards logo

SuperPathways for LINC02183 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for LINC02183 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LINC02183 Gene

Drugs & Compounds for LINC02183 Gene

No Compound Related Data Available

Transcripts for LINC02183 Gene

mRNA/cDNA for LINC02183 Gene

1 RNACentral transcripts :
1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
1 LNCipedia transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for LINC02183 Gene

No ASD Table

Relevant External Links for LINC02183 Gene

GeneLoc Exon Structure for
LINC02183

Expression for LINC02183 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LINC02183 Gene

Orthologs for LINC02183 Gene

Evolution for LINC02183 Gene

ENSEMBL:
Gene Tree for LINC02183 (if available)
TreeFam:
Gene Tree for LINC02183 (if available)

No data available for Orthologs for LINC02183 Gene

Paralogs for LINC02183 Gene

No data available for Paralogs for LINC02183 Gene

Variants for LINC02183 Gene

Additional dbSNP identifiers (rs#s) for LINC02183 Gene

Additional Variant Information for LINC02183 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
LINC02183

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for LINC02183 Gene

Disorders for LINC02183 Gene

No disorders were found for LINC02183 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LINC02183 Gene

Publications for LINC02183 Gene

No publications were found for LINC02183 Gene.

No data available for Mastermind for LINC02183 Gene

Products for LINC02183 Gene

Sources for LINC02183 Gene